Literature DB >> 26156103

PHDs govern plant development.

Alfonso Mouriz1, Leticia López-González, Jose A Jarillo, Manuel Piñeiro.   

Abstract

Posttranslational modifications present in the amino-terminal tails of histones play a pivotal role in the chromatin-mediated regulation of gene expression patterns that control plant developmental transitions. Therefore, the function of protein domains that specifically recognize these histone covalent modifications and recruit chromatin remodeling complexes and the transcriptional machinery to modulate gene expression is essential for a proper control of plant development. Plant HomeoDomain (PHD) motifs act as effectors that can specifically bind a number of histone modifications and mediate the activation or repression of underlying genes. In this review we summarize recent findings that emphasize the crucial role of this versatile family of chromatin "reader" domains in the transcriptional regulation of plant developmental processes such as meiosis and postmeiotic events during pollen maturation, embryo meristem initiation and root development, germination as well as flowering time.

Entities:  

Keywords:  Arabidopsis; chromatin remodeling; flowering time; germination; meiosis; plant homeodomain; root development

Mesh:

Substances:

Year:  2015        PMID: 26156103      PMCID: PMC4622442          DOI: 10.4161/15592324.2014.993253

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  63 in total

1.  The MALE STERILITY1 gene of Arabidopsis, encoding a nuclear protein with a PHD-finger motif, is expressed in tapetal cells and is required for pollen maturation.

Authors:  Takuya Ito; Kazuo Shinozaki
Journal:  Plant Cell Physiol       Date:  2002-11       Impact factor: 4.927

2.  PERSISTENT TAPETAL CELL1 encodes a PHD-finger protein that is required for tapetal cell death and pollen development in rice.

Authors:  Hui Li; Zheng Yuan; Gema Vizcay-Barrena; Caiyun Yang; Wanqi Liang; Jie Zong; Zoe A Wilson; Dabing Zhang
Journal:  Plant Physiol       Date:  2011-04-22       Impact factor: 8.340

Review 3.  Many keys to push: diversifying the 'readership' of plant homeodomain fingers.

Authors:  Yuanyuan Li; Haitao Li
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2012-01       Impact factor: 3.848

4.  Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2.

Authors:  Pedro V Peña; Foteini Davrazou; Xiaobing Shi; Kay L Walter; Vladislav V Verkhusha; Or Gozani; Rui Zhao; Tatiana G Kutateladze
Journal:  Nature       Date:  2006-05-21       Impact factor: 49.962

Review 5.  Timing is everything in plant development. The central role of floral repressors.

Authors:  Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Sci       Date:  2011-06-29       Impact factor: 4.729

6.  Control of embryonic meristem initiation in Arabidopsis by PHD-finger protein complexes.

Authors:  Shunsuke Saiga; Barbara Möller; Ayako Watanabe-Taneda; Mitsutomo Abe; Dolf Weijers; Yoshibumi Komeda
Journal:  Development       Date:  2012-02-29       Impact factor: 6.868

7.  Arabidopsis plant homeodomain finger proteins operate downstream of auxin accumulation in specifying the vasculature and primary root meristem.

Authors:  Carole L Thomas; Dominik Schmidt; Emmanuelle M Bayer; Rene Dreos; Andrew J Maule
Journal:  Plant J       Date:  2009-03-24       Impact factor: 6.417

8.  Chromatin-dependent repression of the Arabidopsis floral integrator genes involves plant specific PHD-containing proteins.

Authors:  Leticia López-González; Alfonso Mouriz; Laura Narro-Diego; Regla Bustos; José Miguel Martínez-Zapater; Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Cell       Date:  2014-10-03       Impact factor: 11.277

Review 9.  Handpicking epigenetic marks with PHD fingers.

Authors:  Catherine A Musselman; Tatiana G Kutateladze
Journal:  Nucleic Acids Res       Date:  2011-08-03       Impact factor: 16.971

Review 10.  Remembering the prolonged cold of winter.

Authors:  Jie Song; Judith Irwin; Caroline Dean
Journal:  Curr Biol       Date:  2013-09-09       Impact factor: 10.834

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  8 in total

1.  CaVIL1, a plant homeodomain gene that promotes flowering in pepper.

Authors:  Vijee Mohan; Yelena Borovsky; Itzhak Kamara; Hanita Zemach; Ilan Paran
Journal:  Theor Appl Genet       Date:  2018-09-07       Impact factor: 5.699

2.  SUMOylated SNF2PH promotes variant surface glycoprotein expression in bloodstream trypanosomes.

Authors:  Andreu Saura; Paula A Iribarren; Domingo Rojas-Barros; Jean M Bart; Diana López-Farfán; Eduardo Andrés-León; Isabel Vidal-Cobo; Cordula Boehm; Vanina E Alvarez; Mark C Field; Miguel Navarro
Journal:  EMBO Rep       Date:  2019-11-06       Impact factor: 9.071

3.  The PHD finger of Arabidopsis SIZ1 recognizes trimethylated histone H3K4 mediating SIZ1 function and abiotic stress response.

Authors:  Kenji Miura; Na Renhu; Takuya Suzaki
Journal:  Commun Biol       Date:  2020-01-10

4.  Ectopic expression of Medicago truncatula homeodomain finger protein, MtPHD6, enhances drought tolerance in Arabidopsis.

Authors:  Wenli Quan; Xun Liu; Lihua Wang; Mingzhu Yin; Li Yang; Zhulong Chan
Journal:  BMC Genomics       Date:  2019-12-16       Impact factor: 3.969

5.  Differential gene expression among three sex types reveals a MALE STERILITY 1 (CpMS1) for sex differentiation in papaya.

Authors:  Dessireé Zerpa-Catanho; Jennifer Wai; Ming Li Wang; Li'ang Yu; Julie Nguyen; Ray Ming
Journal:  BMC Plant Biol       Date:  2019-12-09       Impact factor: 4.215

6.  The VIL gene CRAWLING ELEPHANT controls maturation and differentiation in tomato via polycomb silencing.

Authors:  Ido Shwartz; Chen Yahav; Neta Kovetz; Matan Levy; Alon Israeli; Maya Bar; Katherine L Duval; Ellen G Krall; Naama Teboul; José M Jiménez-Gómez; Roger B Deal; Naomi Ori
Journal:  PLoS Genet       Date:  2022-03-07       Impact factor: 5.917

Review 7.  Insights Into the Function of the NuA4 Complex in Plants.

Authors:  Loreto Espinosa-Cores; Laura Bouza-Morcillo; Javier Barrero-Gil; Verónica Jiménez-Suárez; Ana Lázaro; Raquel Piqueras; José A Jarillo; Manuel Piñeiro
Journal:  Front Plant Sci       Date:  2020-02-21       Impact factor: 5.753

8.  Genome wide survey, evolution and expression analysis of PHD finger genes reveal their diverse roles during the development and abiotic stress responses in Brassica rapa L.

Authors:  Intikhab Alam; Cui-Cui Liu; Hong-Liu Ge; Khadija Batool; Yan-Qing Yang; Yun-Hai Lu
Journal:  BMC Genomics       Date:  2019-10-24       Impact factor: 3.969

  8 in total

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