Literature DB >> 16839870

It takes a PHD to read the histone code.

Jane Mellor1.   

Abstract

The pattern of histone modifications, called the histone code, influences transitions between chromatin states and the regulation of transcriptional activity. Four recent papers describe how plant homeodomain (PHD) finger proteins read part of this code. The PHD finger may promote both gene expression and repression through interactions with trimethylated lysine 4 on histone 3 (H3K4), a universal modification at the beginning of active genes.

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Year:  2006        PMID: 16839870     DOI: 10.1016/j.cell.2006.06.028

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  80 in total

1.  Crystallization and preliminary X-ray diffraction analysis of the dimerization domain of the tumour suppressor ING4.

Authors:  Simone Culurgioni; Inés G Muñoz; Alicia Palacios; Pilar Redondo; Francisco J Blanco; Guillermo Montoya
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-30

Review 2.  PHDs govern plant development.

Authors:  Alfonso Mouriz; Leticia López-González; Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Signal Behav       Date:  2015

3.  Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs.

Authors:  Sean D Taverna; Serge Ilin; Richard S Rogers; Jason C Tanny; Heather Lavender; Haitao Li; Lindsey Baker; John Boyle; Lauren P Blair; Brian T Chait; Dinshaw J Patel; John D Aitchison; Alan J Tackett; C David Allis
Journal:  Mol Cell       Date:  2006-12-08       Impact factor: 17.970

4.  Hypermethylated in cancer 1 (HIC1) recruits polycomb repressive complex 2 (PRC2) to a subset of its target genes through interaction with human polycomb-like (hPCL) proteins.

Authors:  Gaylor Boulay; Marion Dubuissez; Capucine Van Rechem; Antoine Forget; Kristian Helin; Olivier Ayrault; Dominique Leprince
Journal:  J Biol Chem       Date:  2012-02-07       Impact factor: 5.157

Review 5.  Genetic and epigenetic mechanisms of gene regulation during lens development.

Authors:  Ales Cvekl; Melinda K Duncan
Journal:  Prog Retin Eye Res       Date:  2007-07-28       Impact factor: 21.198

Review 6.  Dynamics of coactivator recruitment and chromatin modifications during nuclear receptor mediated transcription.

Authors:  Sayura Aoyagi; Trevor K Archer
Journal:  Mol Cell Endocrinol       Date:  2007-09-05       Impact factor: 4.102

7.  A plant homeodomain in RAG-2 that binds Hypermethylated lysine 4 of histone H3 is necessary for efficient antigen-receptor-gene rearrangement.

Authors:  Yun Liu; Ramesh Subrahmanyam; Tirtha Chakraborty; Ranjan Sen; Stephen Desiderio
Journal:  Immunity       Date:  2007-10-11       Impact factor: 31.745

8.  Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini.

Authors:  Sean D Taverna; Beatrix M Ueberheide; Yifan Liu; Alan J Tackett; Robert L Diaz; Jeffrey Shabanowitz; Brian T Chait; Donald F Hunt; C David Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-06       Impact factor: 11.205

9.  dCHD3, a novel ATP-dependent chromatin remodeler associated with sites of active transcription.

Authors:  Magdalena Murawska; Natascha Kunert; Joke van Vugt; Gernot Längst; Elisabeth Kremmer; Colin Logie; Alexander Brehm
Journal:  Mol Cell Biol       Date:  2008-02-04       Impact factor: 4.272

Review 10.  The origins of the Rag genes--from transposition to V(D)J recombination.

Authors:  Sebastian D Fugmann
Journal:  Semin Immunol       Date:  2009-12-09       Impact factor: 11.130

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