Literature DB >> 17114575

A PHD finger protein involved in both the vernalization and photoperiod pathways in Arabidopsis.

Sibum Sung1, Robert J Schmitz, Richard M Amasino.   

Abstract

The proper timing of flowering is critical for successful reproduction. The perception of the seasonal cues of day-length changes and exposure to cold influences flowering time in many plant species through the photoperiod and vernalization pathways, respectively. Here we show that a plant homeodomain (PHD) finger-containing protein, VIN3-LIKE 1 (VIL1), participates in both the photoperiod and vernalization pathways in Arabidopsis thaliana by regulating expression of the related floral repressors FLOWERING LOCUS C (FLC) and FLOWERING LOCUS M (FLM). In the vernalization pathway, VIL1, along with VERNALIZATION INSENSITIVE 3 (VIN3), is necessary for the modifications to FLC and FLM chromatin that are associated with an epigenetically silenced state and with acquisition of competence to flower. In addition, VIL1 regulates FLM independently of VIN3 in a photoperiod-dependent manner.

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Year:  2006        PMID: 17114575      PMCID: PMC1686601          DOI: 10.1101/gad.1493306

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  26 in total

1.  Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

Authors:  U Johanson; J West; C Lister; S Michaels; R Amasino; C Dean
Journal:  Science       Date:  2000-10-13       Impact factor: 47.728

2.  Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications.

Authors:  Lianna Johnson; Sahana Mollah; Benjamin A Garcia; Tara L Muratore; Jeffrey Shabanowitz; Donald F Hunt; Steven E Jacobsen
Journal:  Nucleic Acids Res       Date:  2004-12-14       Impact factor: 16.971

3.  Profiling histone modification patterns in plants using genomic tiling microarrays.

Authors:  Anne-Valérie Gendrel; Zachary Lippman; Rob Martienssen; Vincent Colot
Journal:  Nat Methods       Date:  2005-03       Impact factor: 28.547

4.  The Arabidopsis FLC protein interacts directly in vivo with SOC1 and FT chromatin and is part of a high-molecular-weight protein complex.

Authors:  Chris A Helliwell; Craig C Wood; Masumi Robertson; W James Peacock; Elizabeth S Dennis
Journal:  Plant J       Date:  2006-04       Impact factor: 6.417

5.  Integration of flowering signals in winter-annual Arabidopsis.

Authors:  Scott D Michaels; Edward Himelblau; Sang Yeol Kim; Fritz M Schomburg; Richard M Amasino
Journal:  Plant Physiol       Date:  2004-12-23       Impact factor: 8.340

6.  Epigenetic maintenance of the vernalized state in Arabidopsis thaliana requires LIKE HETEROCHROMATIN PROTEIN 1.

Authors:  Sibum Sung; Yuehui He; Tifani W Eshoo; Yosuke Tamada; Lianna Johnson; Kenji Nakahigashi; Koji Goto; Steve E Jacobsen; Richard M Amasino
Journal:  Nat Genet       Date:  2006-05-07       Impact factor: 38.330

7.  The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation.

Authors:  C C Sheldon; J E Burn; P P Perez; J Metzger; J A Edwards; W J Peacock; E S Dennis
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

8.  Identification of a MADS-box gene, FLOWERING LOCUS M, that represses flowering.

Authors:  K C Scortecci; S D Michaels; R M Amasino
Journal:  Plant J       Date:  2001-04       Impact factor: 6.417

9.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

10.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

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  89 in total

Review 1.  PHDs govern plant development.

Authors:  Alfonso Mouriz; Leticia López-González; Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Signal Behav       Date:  2015

2.  Arabidopsis ORC1 is a PHD-containing H3K4me3 effector that regulates transcription.

Authors:  María de la Paz Sanchez; Crisanto Gutierrez
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-26       Impact factor: 11.205

3.  Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target.

Authors:  Szymon Swiezewski; Fuquan Liu; Andreas Magusin; Caroline Dean
Journal:  Nature       Date:  2009-12-10       Impact factor: 49.962

Review 4.  Winter Memory throughout the Plant Kingdom: Different Paths to Flowering.

Authors:  Frédéric Bouché; Daniel P Woods; Richard M Amasino
Journal:  Plant Physiol       Date:  2016-10-18       Impact factor: 8.340

5.  Vernalization-mediated VIN3 Induction Overcomes the LIKE-HETEROCHROMATIN PROTEIN1/POLYCOMB REPRESSION COMPLEX2-mediated epigenetic repression.

Authors:  Dong-Hwan Kim; Brett R Zografos; Sibum Sung
Journal:  Plant Physiol       Date:  2010-07-29       Impact factor: 8.340

6.  A PHD-polycomb repressive complex 2 triggers the epigenetic silencing of FLC during vernalization.

Authors:  Filomena De Lucia; Pedro Crevillen; Alexandra M E Jones; Thomas Greb; Caroline Dean
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-14       Impact factor: 11.205

7.  Genetic and epigenetic mechanisms underlying vernalization.

Authors:  Dong-Hwan Kim; Sibum Sung
Journal:  Arabidopsis Book       Date:  2014-02-12

Review 8.  Floral induction and monocarpic versus polycarpic life histories.

Authors:  Richard Amasino
Journal:  Genome Biol       Date:  2009-07-02       Impact factor: 13.583

Review 9.  Decoding the epigenetic language of plant development.

Authors:  Ayaz Ahmad; Yong Zhang; Xiao-Feng Cao
Journal:  Mol Plant       Date:  2010-07       Impact factor: 13.164

10.  Soybean GmPHD-type transcription regulators improve stress tolerance in transgenic Arabidopsis plants.

Authors:  Wei Wei; Jian Huang; Yu-Jun Hao; Hong-Feng Zou; Hui-Wen Wang; Jing-Yun Zhao; Xue-Yi Liu; Wan-Ke Zhang; Biao Ma; Jin-Song Zhang; Shou-Yi Chen
Journal:  PLoS One       Date:  2009-09-30       Impact factor: 3.240

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