Literature DB >> 20814452

Improved Resolution in Dipolar NMR Spectra Using Constant Time Evolution PISEMA Experiment.

T Gopinath1, Gianluigi Veglia.   

Abstract

The atomic structure of small molecules and polypeptides can be attained from anisotropic NMR parameters such as dipolar couplings (DC) and chemical shifts (CS). Separated local field experiments resolve DC and CS correlations into two dimensions. However, crowded NMR spectra represent a significant obstacle for the complete resolution of these anisotropic parameters. Using the PISEMA (Polarization Inversion Spin Exchange at the Magic Angle) experiment as a foundation, we designed new pulse schemes that use a constant time evolution in the dipolar (indirect) dimension to measure DC and CS correlations at high resolution. We demonstrated this approach on a 4-pentyl-4'-cyanobiphenyl (5CB) liquid crystal sample, achieving a resolution enhancement ranging from 30 to 60 % for the resonances in the dipolar dimension. These new experiments open the possibility of obtaining significant resolution enhancement for multidimensional NMR experiments carried out on oriented liquid crystalline samples as well as oriented membrane proteins.

Entities:  

Year:  2010        PMID: 20814452      PMCID: PMC2929988          DOI: 10.1016/j.cplett.2010.05.078

Source DB:  PubMed          Journal:  Chem Phys Lett        ISSN: 0009-2614            Impact factor:   2.328


  29 in total

1.  Spectral editing in (13)C MAS NMR under moderately fast spinning conditions.

Authors:  E De Vita; L Frydman
Journal:  J Magn Reson       Date:  2001-02       Impact factor: 2.229

2.  Mathematical aspects of protein structure determination with NMR orientational restraints.

Authors:  J R Quine; Timothy A Cross; Michael S Chapman; Richard Bertram
Journal:  Bull Math Biol       Date:  2004-11       Impact factor: 1.758

Review 3.  Structure elucidation of membrane-associated peptides and proteins in oriented bilayers by solid-state NMR spectroscopy.

Authors:  Akira Naito
Journal:  Solid State Nucl Magn Reson       Date:  2009-07-08       Impact factor: 2.293

4.  Spectroscopic validation of the pentameric structure of phospholamban.

Authors:  Nathaniel J Traaseth; Raffaello Verardi; Kurt D Torgersen; Christine B Karim; David D Thomas; Gianluigi Veglia
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-05       Impact factor: 11.205

5.  High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints.

Authors:  R Ketchem; B Roux; T Cross
Journal:  Structure       Date:  1997-12-15       Impact factor: 5.006

6.  NMR spin locking of proton magnetization under a frequency-switched Lee-Goldburg pulse sequence.

Authors:  Riqiang Fu; Changlin Tian; Timothy A Cross
Journal:  J Magn Reson       Date:  2002-01       Impact factor: 2.229

7.  Backbone structure of the amantadine-blocked trans-membrane domain M2 proton channel from Influenza A virus.

Authors:  Jun Hu; Tom Asbury; Srisairam Achuthan; Conggang Li; Richard Bertram; Jack R Quine; Riqiang Fu; Timothy A Cross
Journal:  Biophys J       Date:  2007-03-23       Impact factor: 4.033

8.  Structural restraints and heterogeneous orientation of the gramicidin A channel closed state in lipid bilayers.

Authors:  Y Mo; T A Cross; W Nerdal
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

9.  High-resolution characterization of liquid-crystalline [60]fullerenes using solid-state nuclear magnetic resonance spectroscopy.

Authors:  Sergey V Dvinskikh; Kazutoshi Yamamoto; David Scanu; Robert Deschenaux; Ayyalusamy Ramamoorthy
Journal:  J Phys Chem B       Date:  2008-09-09       Impact factor: 2.991

10.  Cholesterol reduces pardaxin's dynamics-a barrel-stave mechanism of membrane disruption investigated by solid-state NMR.

Authors:  Ayyalusamy Ramamoorthy; Dong-Kuk Lee; Tennaru Narasimhaswamy; Ravi P R Nanga
Journal:  Biochim Biophys Acta       Date:  2009-08-28
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  7 in total

1.  Multidimensional oriented solid-state NMR experiments enable the sequential assignment of uniformly 15N labeled integral membrane proteins in magnetically aligned lipid bilayers.

Authors:  Kaustubh R Mote; T Gopinath; Nathaniel J Traaseth; Jason Kitchen; Peter L Gor'kov; William W Brey; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2011-11       Impact factor: 2.835

2.  Proton evolved local field solid-state nuclear magnetic resonance using Hadamard encoding: theory and application to membrane proteins.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  J Chem Phys       Date:  2011-08-21       Impact factor: 3.488

3.  Very large residual dipolar couplings from deuterated ubiquitin.

Authors:  Joshua M Ward; Nikolai R Skrynnikov
Journal:  J Biomol NMR       Date:  2012-07-25       Impact factor: 2.835

4.  Orphan spin operators enable the acquisition of multiple 2D and 3D magic angle spinning solid-state NMR spectra.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  J Chem Phys       Date:  2013-05-14       Impact factor: 3.488

5.  NMR Spectroscopy Approach to Study the Structure, Orientation, and Mechanism of the Multidrug Exporter EmrE.

Authors:  Maureen Leninger; Nathaniel J Traaseth
Journal:  Methods Mol Biol       Date:  2018

6.  Determination of structural topology of a membrane protein in lipid bilayers using polarization optimized experiments (POE) for static and MAS solid state NMR spectroscopy.

Authors:  Kaustubh R Mote; T Gopinath; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2013-08-21       Impact factor: 2.835

Review 7.  Sensitivity and resolution enhancement of oriented solid-state NMR: application to membrane proteins.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-08-12       Impact factor: 9.795

  7 in total

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