Literature DB >> 20663918

Physiological levels of TNFalpha stimulation induce stochastic dynamics of NF-kappaB responses in single living cells.

David A Turner1, Pawel Paszek, Dan J Woodcock, David E Nelson, Caroline A Horton, Yunjiao Wang, David G Spiller, David A Rand, Michael R H White, Claire V Harper.   

Abstract

Nuclear factor kappa B (NF-kappaB) signalling is activated by cellular stress and inflammation and regulates cytokine expression. We applied single-cell imaging to investigate dynamic responses to different doses of tumour necrosis factor alpha (TNFalpha). Lower doses activated fewer cells and those responding showed an increasingly variable delay in the initial NF-kappaB nuclear translocation and associated IkappaBalpha degradation. Robust 100 minute nuclear:cytoplasmic NF-kappaB oscillations were observed over a wide range of TNFalpha concentrations. The result is supported by computational analyses, which identified a limit cycle in the system with a stable 100 minute period over a range of stimuli, and indicated no co-operativity in the pathway activation. These results suggest that a stochastic threshold controls functional all-or-nothing responses in individual cells. Deterministic and stochastic models simulated the experimentally observed activation threshold and gave rise to new predictions about the structure of the system and open the way for better mechanistic understanding of physiological TNFalpha activation of inflammatory responses in cells and tissues.

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Year:  2010        PMID: 20663918      PMCID: PMC2915884          DOI: 10.1242/jcs.069641

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  37 in total

1.  Population robustness arising from cellular heterogeneity.

Authors:  Pawel Paszek; Sheila Ryan; Louise Ashall; Kate Sillitoe; Claire V Harper; David G Spiller; David A Rand; Michael R H White
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

2.  Ligand passing: the 75-kDa tumor necrosis factor (TNF) receptor recruits TNF for signaling by the 55-kDa TNF receptor.

Authors:  L A Tartaglia; D Pennica; D V Goeddel
Journal:  J Biol Chem       Date:  1993-09-05       Impact factor: 5.157

Review 3.  Tumour necrosis factors receptor associated signalling molecules and their role in activation of apoptosis, JNK and NF-kappaB.

Authors:  B B Aggarwal
Journal:  Ann Rheum Dis       Date:  2000-11       Impact factor: 19.103

4.  Crystal structure of sTALL-1 reveals a virus-like assembly of TNF family ligands.

Authors:  Yingfang Liu; Liangguo Xu; Natasha Opalka; John Kappler; Hong Bing Shu; Gongyi Zhang
Journal:  Cell       Date:  2002-02-08       Impact factor: 41.582

5.  Recruitment of the IKK signalosome to the p55 TNF receptor: RIP and A20 bind to NEMO (IKKgamma) upon receptor stimulation.

Authors:  S Q Zhang; A Kovalenko; G Cantarella; D Wallach
Journal:  Immunity       Date:  2000-03       Impact factor: 31.745

6.  Oscillations in NF-kappaB signaling control the dynamics of gene expression.

Authors:  D E Nelson; A E C Ihekwaba; M Elliott; J R Johnson; C A Gibney; B E Foreman; G Nelson; V See; C A Horton; D G Spiller; S W Edwards; H P McDowell; J F Unitt; E Sullivan; R Grimley; N Benson; D Broomhead; D B Kell; M R H White
Journal:  Science       Date:  2004-10-22       Impact factor: 47.728

7.  High-throughput and single-cell imaging of NF-kappaB oscillations using monoclonal cell lines.

Authors:  Sina Bartfeld; Simone Hess; Bianca Bauer; Nikolaus Machuy; Lesley A Ogilvie; Johannes Schuchhardt; Thomas F Meyer
Journal:  BMC Cell Biol       Date:  2010-03-16       Impact factor: 4.241

8.  NF-kappa B and TNF-alpha: a positive autocrine loop in human lung mast cells?

Authors:  William R Coward; Yoshimichi Okayama; Hironori Sagara; Susan J Wilson; Stephen T Holgate; Martin K Church
Journal:  J Immunol       Date:  2002-11-01       Impact factor: 5.422

9.  Tumor necrosis factor and interleukin-1 serum levels during severe sepsis in humans.

Authors:  P Damas; A Reuter; P Gysen; J Demonty; M Lamy; P Franchimont
Journal:  Crit Care Med       Date:  1989-10       Impact factor: 7.598

10.  Multi-parameter analysis of the kinetics of NF-kappaB signalling and transcription in single living cells.

Authors:  Glyn Nelson; Luminita Paraoan; David G Spiller; Geraint J C Wilde; Mark A Browne; Peter K Djali; John F Unitt; Elaine Sullivan; Eike Floettmann; Michael R H White
Journal:  J Cell Sci       Date:  2002-03-15       Impact factor: 5.285

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  61 in total

1.  Direct observation of a transient ternary complex during IκBα-mediated dissociation of NF-κB from DNA.

Authors:  Vera Alverdi; Byron Hetrick; Simpson Joseph; Elizabeth A Komives
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-23       Impact factor: 11.205

2.  Distinct single-cell signaling characteristics are conferred by the MyD88 and TRIF pathways during TLR4 activation.

Authors:  Zhang Cheng; Brooks Taylor; Diana R Ourthiague; Alexander Hoffmann
Journal:  Sci Signal       Date:  2015-07-14       Impact factor: 8.192

3.  Evaporation-based microfluidic production of oil-free cell-containing hydrogel particles.

Authors:  Rong Fan; Kubra Naqvi; Krishna Patel; Jun Sun; Jiandi Wan
Journal:  Biomicrofluidics       Date:  2015-03-27       Impact factor: 2.800

4.  Irregular Ca(2+) oscillations regulate transcription via cumulative spike duration and spike amplitude.

Authors:  Shanshan Song; Jiansha Li; Liping Zhu; Lei Cai; Qian Xu; Chen Ling; Yuan Su; Qinghua Hu
Journal:  J Biol Chem       Date:  2012-10-15       Impact factor: 5.157

Review 5.  Robustness of signal transduction pathways.

Authors:  Nils Blüthgen; Stefan Legewie
Journal:  Cell Mol Life Sci       Date:  2012-09-25       Impact factor: 9.261

6.  Interrogation of inhibitor of nuclear factor κB α/nuclear factor κB (IκBα/NF-κB) negative feedback loop dynamics: from single cells to live animals in vivo.

Authors:  Britney L Moss; Adnan Elhammali; Tiffanie Fowlkes; Shimon Gross; Anant Vinjamoori; Christopher H Contag; David Piwnica-Worms
Journal:  J Biol Chem       Date:  2012-07-17       Impact factor: 5.157

7.  Observing single cell NF-κB dynamics under stimulant concentration gradient.

Authors:  Yousef Awwad; Tao Geng; Albert S Baldwin; Chang Lu
Journal:  Anal Chem       Date:  2012-01-19       Impact factor: 6.986

8.  NF-κB Dynamics Discriminate between TNF Doses in Single Cells.

Authors:  Qiuhong Zhang; Sanjana Gupta; David L Schipper; Gabriel J Kowalczyk; Allison E Mancini; James R Faeder; Robin E C Lee
Journal:  Cell Syst       Date:  2017-11-08       Impact factor: 10.304

9.  Integrative analysis suggests cell type-specific decoding of NF-κB dynamics.

Authors:  Erik W Martin; Alicja Pacholewska; Heta Patel; Himanshu Dashora; Myong-Hee Sung
Journal:  Sci Signal       Date:  2020-02-25       Impact factor: 8.192

10.  Type of noise defines global attractors in bistable molecular regulatory systems.

Authors:  Joanna Jaruszewicz; Pawel J Zuk; Tomasz Lipniacki
Journal:  J Theor Biol       Date:  2012-10-11       Impact factor: 2.691

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