Literature DB >> 22263650

Observing single cell NF-κB dynamics under stimulant concentration gradient.

Yousef Awwad1, Tao Geng, Albert S Baldwin, Chang Lu.   

Abstract

Study of cell signaling often requires examination of the cellular dynamics under variation in the stimulant concentration. Such variation has typically been conducted by dispensing cell populations in a number of chambers or wells containing discrete concentrations. Such practice adds to the complexity associated with experimental or device design and requires substantial labor for implementation. Furthermore, there is also potential risk of missing important results due to the often arbitrary selection of discrete concentration values for testing. In this Letter, we study NF-κB activation and translocation at the single cell level using a microfluidic device that generates continuously varying concentration gradient. We use only three device settings to cover stimulant (interleukin-1β) concentrations of 4 orders of magnitude (0.001-10 ng/mL). Such device allows us to study temporal dynamics of NF-κB in single cells under different stimulant concentrations by real-time imaging. Interestingly, our results reveal that, while the percent of cells with NF-κB translocation decreases with lower stimulant concentration in the range of 0.1-0.001 ng/mL, the response time of such translocation remains constant, reflected by the single cell data.
© 2012 American Chemical Society

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22263650      PMCID: PMC3299085          DOI: 10.1021/ac203209t

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  22 in total

Review 1.  Circuitry of nuclear factor kappaB signaling.

Authors:  Alexander Hoffmann; David Baltimore
Journal:  Immunol Rev       Date:  2006-04       Impact factor: 12.988

2.  Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible.

Authors:  James E. Ferrell; Wen Xiong
Journal:  Chaos       Date:  2001-03       Impact factor: 3.642

3.  Population robustness arising from cellular heterogeneity.

Authors:  Pawel Paszek; Sheila Ryan; Louise Ashall; Kate Sillitoe; Claire V Harper; David G Spiller; David A Rand; Michael R H White
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

4.  Comment on "Oscillations in NF-kappaB signaling control the dynamics of gene expression".

Authors:  Derren Barken; Chiaochun Joanne Wang; Jeff Kearns; Raymond Cheong; Alexander Hoffmann; Andre Levchenko
Journal:  Science       Date:  2005-04-01       Impact factor: 47.728

5.  Cell migration and polarity on microfabricated gradients of extracellular matrix proteins.

Authors:  Rico C Gunawan; Jonathan Silvestre; H Rex Gaskins; Paul J A Kenis; Deborah E Leckband
Journal:  Langmuir       Date:  2006-04-25       Impact factor: 3.882

Review 6.  Transcriptional regulation via the NF-kappaB signaling module.

Authors:  A Hoffmann; G Natoli; G Ghosh
Journal:  Oncogene       Date:  2006-10-30       Impact factor: 9.867

7.  Cutting edge: TCR ligation triggers digital activation of NF-kappaB.

Authors:  Lara M Kingeter; Suman Paul; Sean K Maynard; Natalia G Cartwright; Brian C Schaefer
Journal:  J Immunol       Date:  2010-09-20       Impact factor: 5.422

8.  Oscillations in NF-kappaB signaling control the dynamics of gene expression.

Authors:  D E Nelson; A E C Ihekwaba; M Elliott; J R Johnson; C A Gibney; B E Foreman; G Nelson; V See; C A Horton; D G Spiller; S W Edwards; H P McDowell; J F Unitt; E Sullivan; R Grimley; N Benson; D Broomhead; D B Kell; M R H White
Journal:  Science       Date:  2004-10-22       Impact factor: 47.728

9.  A noisy paracrine signal determines the cellular NF-kappaB response to lipopolysaccharide.

Authors:  Timothy K Lee; Elissa M Denny; Jayodita C Sanghvi; Jahlionais E Gaston; Nathaniel D Maynard; Jacob J Hughey; Markus W Covert
Journal:  Sci Signal       Date:  2009-10-20       Impact factor: 8.192

10.  Multi-parameter analysis of the kinetics of NF-kappaB signalling and transcription in single living cells.

Authors:  Glyn Nelson; Luminita Paraoan; David G Spiller; Geraint J C Wilde; Mark A Browne; Peter K Djali; John F Unitt; Elaine Sullivan; Eike Floettmann; Michael R H White
Journal:  J Cell Sci       Date:  2002-03-15       Impact factor: 5.285

View more
  4 in total

1.  Genomic DNA extraction from cells by electroporation on an integrated microfluidic platform.

Authors:  Tao Geng; Ning Bao; Nammalwar Sriranganathanw; Liwu Li; Chang Lu
Journal:  Anal Chem       Date:  2012-10-23       Impact factor: 6.986

2.  A generalizable, tunable microfluidic platform for delivering fast temporally varying chemical signals to probe single-cell response dynamics.

Authors:  Loice Chingozha; Mei Zhan; Cheng Zhu; Hang Lu
Journal:  Anal Chem       Date:  2014-10-10       Impact factor: 6.986

3.  A checklist for successful quantitative live cell imaging in systems biology.

Authors:  Myong-Hee Sung
Journal:  Cells       Date:  2013-04-29       Impact factor: 6.600

4.  Compartmentalized microchannel array for high-throughput analysis of single cell polarized growth and dynamics.

Authors:  Tao Geng; Erin L Bredeweg; Craig J Szymanski; Bingwen Liu; Scott E Baker; Galya Orr; James E Evans; Ryan T Kelly
Journal:  Sci Rep       Date:  2015-11-04       Impact factor: 4.379

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.