Literature DB >> 17643374

Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits.

Chandana Barat1, Partha P Datta, V Samuel Raj, Manjuli R Sharma, Hideko Kaji, Akira Kaji, Rajendra K Agrawal.   

Abstract

After the termination step of translation, the posttermination complex (PoTC), composed of the ribosome, mRNA, and a deacylated tRNA, is processed by the concerted action of the ribosome-recycling factor (RRF), elongation factor G (EF-G), and GTP to prepare the ribosome for a fresh round of protein synthesis. However, the sequential steps of dissociation of the ribosomal subunits, and release of mRNA and deacylated tRNA from the PoTC, are unclear. Using three-dimensional cryo-electron microscopy, in conjunction with undecagold-labeled RRF, we show that RRF is capable of spontaneously moving from its initial binding site on the 70S Escherichia coli ribosome to a site exclusively on the large 50S ribosomal subunit. This movement leads to disruption of crucial intersubunit bridges and thereby to the dissociation of the two ribosomal subunits, the central event in ribosome recycling. Results of this study allow us to propose a model of ribosome recycling.

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Year:  2007        PMID: 17643374     DOI: 10.1016/j.molcel.2007.06.005

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  23 in total

1.  Ribosome recycling step in yeast cytoplasmic protein synthesis is catalyzed by eEF3 and ATP.

Authors:  Shinya Kurata; Klaus H Nielsen; Sarah F Mitchell; Jon R Lorsch; Akira Kaji; Hideko Kaji
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

2.  Structural insights into initial and intermediate steps of the ribosome-recycling process.

Authors:  Takeshi Yokoyama; Tanvir R Shaikh; Nobuhiro Iwakura; Hideko Kaji; Akira Kaji; Rajendra K Agrawal
Journal:  EMBO J       Date:  2012-03-02       Impact factor: 11.598

3.  Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins.

Authors:  Manjuli R Sharma; Daniel N Wilson; Partha P Datta; Chandana Barat; Frank Schluenzen; Paola Fucini; Rajendra K Agrawal
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-27       Impact factor: 11.205

4.  PSRP1 is not a ribosomal protein, but a ribosome-binding factor that is recycled by the ribosome-recycling factor (RRF) and elongation factor G (EF-G).

Authors:  Manjuli R Sharma; Alexandra Dönhöfer; Chandana Barat; Viter Marquez; Partha P Datta; Paola Fucini; Daniel N Wilson; Rajendra K Agrawal
Journal:  J Biol Chem       Date:  2009-12-04       Impact factor: 5.157

Review 5.  Structural basis for protein synthesis: snapshots of the ribosome in motion.

Authors:  Jonas Noeske; Jamie H D Cate
Journal:  Curr Opin Struct Biol       Date:  2012-08-04       Impact factor: 6.809

Review 6.  Bacterial Protein Synthesis as a Target for Antibiotic Inhibition.

Authors:  Stefan Arenz; Daniel N Wilson
Journal:  Cold Spring Harb Perspect Med       Date:  2016-09-01       Impact factor: 6.915

7.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

8.  Structural Insights into ribosome recycling factor interactions with the 70S ribosome.

Authors:  Raj D Pai; Wen Zhang; Barbara S Schuwirth; Go Hirokawa; Hideko Kaji; Akira Kaji; Jamie H D Cate
Journal:  J Mol Biol       Date:  2008-01-03       Impact factor: 5.469

9.  Complementary roles of initiation factor 1 and ribosome recycling factor in 70S ribosome splitting.

Authors:  Michael Y Pavlov; Ayman Antoun; Martin Lovmar; Måns Ehrenberg
Journal:  EMBO J       Date:  2008-05-22       Impact factor: 11.598

10.  Distinct functions of elongation factor G in ribosome recycling and translocation.

Authors:  Andreas Savelsbergh; Marina V Rodnina; Wolfgang Wintermeyer
Journal:  RNA       Date:  2009-03-26       Impact factor: 4.942

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