Literature DB >> 15949442

Splitting of the posttermination ribosome into subunits by the concerted action of RRF and EF-G.

Andrey V Zavialov1, Vasili V Hauryliuk, Måns Ehrenberg.   

Abstract

After peptide release by a class-1 release factor, the ribosomal subunits must be recycled back to initiation. We have demonstrated that the distance between a strong Shine-Dalgarno (SD) sequence and a codon in the P site is crucial for the binding stability of the deacylated tRNA in the P site of the posttermination ribosome and the in-frame maintenance of its mRNA. We show that the elongation factor EF-G and the ribosomal recycling factor RRF split the ribosome into subunits in the absence of initiation factor 3 (IF3) by a mechanism that requires both GTP and GTP hydrolysis. Taking into account that EF-G in the GTP form and RRF bind with positive cooperativity to the free 50S subunit but with negative cooperativity to the 70S ribosome, we suggest a mechanism for ribosome recycling that specifies distinct roles for EF-G, RRF, and IF3.

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Year:  2005        PMID: 15949442     DOI: 10.1016/j.molcel.2005.05.016

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  67 in total

1.  Ribosome recycling step in yeast cytoplasmic protein synthesis is catalyzed by eEF3 and ATP.

Authors:  Shinya Kurata; Klaus H Nielsen; Sarah F Mitchell; Jon R Lorsch; Akira Kaji; Hideko Kaji
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

2.  Kinetic analysis reveals the ordered coupling of translation termination and ribosome recycling in yeast.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

3.  Structural insights into initial and intermediate steps of the ribosome-recycling process.

Authors:  Takeshi Yokoyama; Tanvir R Shaikh; Nobuhiro Iwakura; Hideko Kaji; Akira Kaji; Rajendra K Agrawal
Journal:  EMBO J       Date:  2012-03-02       Impact factor: 11.598

4.  HflX is a ribosome-splitting factor rescuing stalled ribosomes under stress conditions.

Authors:  Yanqing Zhang; Chandra Sekhar Mandava; Wei Cao; Xiaojing Li; Dejiu Zhang; Ningning Li; Yixiao Zhang; Xiaoxiao Zhang; Yan Qin; Kaixia Mi; Jianlin Lei; Suparna Sanyal; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2015-10-12       Impact factor: 15.369

5.  Destabilization of the P site codon-anticodon helix results from movement of tRNA into the P/E hybrid state within the ribosome.

Authors:  Kevin G McGarry; Sarah E Walker; Huanyu Wang; Kurt Fredrick
Journal:  Mol Cell       Date:  2005-11-23       Impact factor: 17.970

Review 6.  Mechanism of recycling of post-termination ribosomal complexes in eubacteria: a new role of initiation factor 3.

Authors:  Anuradha Seshadri; Umesh Varshney
Journal:  J Biosci       Date:  2006-06       Impact factor: 1.826

7.  Molecular basis for temperature sensing by an RNA thermometer.

Authors:  Saheli Chowdhury; Christophe Maris; Frédéric H-T Allain; Franz Narberhaus
Journal:  EMBO J       Date:  2006-05-18       Impact factor: 11.598

8.  How initiation factors tune the rate of initiation of protein synthesis in bacteria.

Authors:  Ayman Antoun; Michael Y Pavlov; Martin Lovmar; Måns Ehrenberg
Journal:  EMBO J       Date:  2006-05-25       Impact factor: 11.598

9.  Pneumococcal RNase R globally impacts protein synthesis by regulating the amount of actively translating ribosomes.

Authors:  Cátia Bárria; Susana Domingues; Cecília Maria Arraiano
Journal:  RNA Biol       Date:  2019-01-13       Impact factor: 4.652

10.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

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