Literature DB >> 20441767

Measurement of the copy number of the master quorum-sensing regulator of a bacterial cell.

Shu-Wen Teng1, Yufang Wang, Kimberly C Tu, Tao Long, Pankaj Mehta, Ned S Wingreen, Bonnie L Bassler, N P Ong.   

Abstract

Quorum-sensing is the mechanism by which bacteria communicate and synchronize group behaviors. Quantitative information on parameters such as the copy number of particular quorum-sensing proteins should contribute strongly to understanding how the quorum-sensing network functions. Here, we show that the copy number of the master regulator protein LuxR in Vibrio harveyi can be determined in vivo by exploiting small-number fluctuations of the protein distribution when cells undergo division. When a cell divides, both its volume and LuxR protein copy number, N, are partitioned with slight asymmetries. We measured the distribution functions describing the partitioning of the protein fluorescence and the cell volume. The fluorescence distribution is found to narrow systematically as the LuxR population increases, whereas the volume partitioning is unchanged. Analyzing these changes statistically, we determined that N = 80-135 dimers at low cell density and 575 dimers at high cell density. In addition, we measured the static distribution of LuxR over a large (3000) clonal population. Combining the static and time-lapse experiments, we determine the magnitude of the Fano factor of the distribution. This technique has broad applicability as a general in vivo technique for measuring protein copy number and burst size. Copyright (c) 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20441767      PMCID: PMC2862190          DOI: 10.1016/j.bpj.2010.01.031

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  33 in total

1.  Intrinsic noise in gene regulatory networks.

Authors:  M Thattai; A van Oudenaarden
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

2.  Regulation of noise in the expression of a single gene.

Authors:  Ertugrul M Ozbudak; Mukund Thattai; Iren Kurtser; Alan D Grossman; Alexander van Oudenaarden
Journal:  Nat Genet       Date:  2002-04-22       Impact factor: 38.330

3.  Random signal fluctuations can reduce random fluctuations in regulated components of chemical regulatory networks.

Authors:  J Paulsson; M Ehrenberg
Journal:  Phys Rev Lett       Date:  2000-06-05       Impact factor: 9.161

4.  Stochastic gene expression in a single cell.

Authors:  Michael B Elowitz; Arnold J Levine; Eric D Siggia; Peter S Swain
Journal:  Science       Date:  2002-08-16       Impact factor: 47.728

5.  Control of stochasticity in eukaryotic gene expression.

Authors:  Jonathan M Raser; Erin K O'Shea
Journal:  Science       Date:  2004-05-27       Impact factor: 47.728

6.  One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products.

Authors:  K A Datsenko; B L Wanner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

7.  A model for the statistical fluctuations of protein numbers in a microbial population.

Authors:  O G Berg
Journal:  J Theor Biol       Date:  1978-04-20       Impact factor: 2.691

8.  The Vibrio harveyi quorum-sensing system uses shared regulatory components to discriminate between multiple autoinducers.

Authors:  Christopher M Waters; Bonnie L Bassler
Journal:  Genes Dev       Date:  2006-10-01       Impact factor: 11.361

9.  Robustness and the cycle of phosphorylation and dephosphorylation in a two-component regulatory system.

Authors:  Eric Batchelor; Mark Goulian
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-09       Impact factor: 11.205

10.  Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi quorum-sensing response.

Authors:  Kimberly C Tu; Tao Long; Sine L Svenningsen; Ned S Wingreen; Bonnie L Bassler
Journal:  Mol Cell       Date:  2010-02-26       Impact factor: 17.970

View more
  24 in total

1.  Quantification of fluorophore copy number from intrinsic fluctuations during fluorescence photobleaching.

Authors:  Chitra R Nayak; Andrew D Rutenberg
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

2.  Protein-level fluctuation correlation at the microcolony level and its application to the Vibrio harveyi quorum-sensing circuit.

Authors:  Yufang Wang; Kimberly C Tu; N P Ong; Bonnie L Bassler; Ned S Wingreen
Journal:  Biophys J       Date:  2011-06-22       Impact factor: 4.033

3.  Microbiology: tuning communication fidelity.

Authors:  Kirsten Jung
Journal:  Nat Chem Biol       Date:  2011-07-18       Impact factor: 15.040

Review 4.  Quorum Sensing Gene Regulation by LuxR/HapR Master Regulators in Vibrios.

Authors:  Alyssa S Ball; Ryan R Chaparian; Julia C van Kessel
Journal:  J Bacteriol       Date:  2017-09-05       Impact factor: 3.490

5.  Hierarchical Transcriptional Control of the LuxR Quorum-Sensing Regulon of Vibrio harveyi.

Authors:  Ryan R Chaparian; Alyssa S Ball; Julia C van Kessel
Journal:  J Bacteriol       Date:  2020-06-25       Impact factor: 3.490

6.  Minus-end-directed Kinesin-14 motors align antiparallel microtubules to control metaphase spindle length.

Authors:  Austin J Hepperla; Patrick T Willey; Courtney E Coombes; Breanna M Schuster; Maryam Gerami-Nejad; Mark McClellan; Soumya Mukherjee; Janet Fox; Mark Winey; David J Odde; Eileen O'Toole; Melissa K Gardner
Journal:  Dev Cell       Date:  2014-10-13       Impact factor: 12.270

7.  The transcription factor titration effect dictates level of gene expression.

Authors:  Robert C Brewster; Franz M Weinert; Hernan G Garcia; Dan Song; Mattias Rydenfelt; Rob Phillips
Journal:  Cell       Date:  2014-03-06       Impact factor: 41.582

8.  Promoter Boundaries for the luxCDABE and betIBA-proXWV Operons in Vibrio harveyi Defined by the Method Rapid Arbitrary PCR Insertion Libraries (RAIL).

Authors:  Christine M Hustmyer; Chelsea A Simpson; Stephen G Olney; Douglas B Rusch; Matthew L Bochman; Julia C van Kessel
Journal:  J Bacteriol       Date:  2018-05-09       Impact factor: 3.490

Review 9.  Cellular decision making and biological noise: from microbes to mammals.

Authors:  Gábor Balázsi; Alexander van Oudenaarden; James J Collins
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

10.  AphA and LuxR/HapR reciprocally control quorum sensing in vibrios.

Authors:  Steven T Rutherford; Julia C van Kessel; Yi Shao; Bonnie L Bassler
Journal:  Genes Dev       Date:  2011-02-15       Impact factor: 11.361

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.