Literature DB >> 12183631

Stochastic gene expression in a single cell.

Michael B Elowitz1, Arnold J Levine, Eric D Siggia, Peter S Swain.   

Abstract

Clonal populations of cells exhibit substantial phenotypic variation. Such heterogeneity can be essential for many biological processes and is conjectured to arise from stochasticity, or noise, in gene expression. We constructed strains of Escherichia coli that enable detection of noise and discrimination between the two mechanisms by which it is generated. Both stochasticity inherent in the biochemical process of gene expression (intrinsic noise) and fluctuations in other cellular components (extrinsic noise) contribute substantially to overall variation. Transcription rate, regulatory dynamics, and genetic factors control the amplitude of noise. These results establish a quantitative foundation for modeling noise in genetic networks and reveal how low intracellular copy numbers of molecules can fundamentally limit the precision of gene regulation.

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Year:  2002        PMID: 12183631     DOI: 10.1126/science.1070919

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  1700 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-01       Impact factor: 11.205

2.  On schemes of combinatorial transcription logic.

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-17       Impact factor: 11.205

3.  Stochastic gene expression as a many-body problem.

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5.  Single-cell behavior and population heterogeneity: solving an inverse problem to compute the intrinsic physiological state functions.

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6.  Noise effects in nonlinear biochemical signaling.

Authors:  Neda Bostani; David A Kessler; Nadav M Shnerb; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-01-03

7.  Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration.

Authors:  Mattias Rydenfelt; Robert Sidney Cox; Hernan Garcia; Rob Phillips
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2014-01-06

8.  Robust, tunable genetic memory from protein sequestration combined with positive feedback.

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Journal:  Nucleic Acids Res       Date:  2015-09-17       Impact factor: 16.971

9.  Pressure inactivation of Bacillus endospores.

Authors:  Dirk Margosch; Michael G Gänzle; Matthias A Ehrmann; Rudi F Vogel
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

10.  UvrD303, a hyperhelicase mutant that antagonizes RecA-dependent SOS expression by a mechanism that depends on its C terminus.

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