Literature DB >> 23153958

New insights into replisome fluidity during chromosome replication.

Isabel Kurth1, Mike O'Donnell.   

Abstract

Several paradigm shifting advances have recently been made on the composition and function of the chromosomal DNA replication machinery. Replisomes appear to be more fluid and dynamic than ever imagined, enabling rapid and efficient bypass of roadblocks and template lesions while faithfully replicating chromosomal DNA. This fluidity is determined by many layers of regulation, which reach beyond the role of replisome components themselves. In fact, recent studies show that additional polymerases, post-transcriptional modifications, and chromatin structure are required for complete chromosome duplication. Many of these factors are involved with the more complex events that take place during lagging-strand synthesis. These, and other recent discoveries, are the focus of this review.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23153958      PMCID: PMC3597760          DOI: 10.1016/j.tibs.2012.10.003

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  73 in total

1.  DNA polymerase switching: II. Replication factor C abrogates primer synthesis by DNA polymerase alpha at a critical length.

Authors:  R Mossi; R C Keller; E Ferrari; U Hübscher
Journal:  J Mol Biol       Date:  2000-01-28       Impact factor: 5.469

Review 2.  A new model for SOS-induced mutagenesis: how RecA protein activates DNA polymerase V.

Authors:  Meghna Patel; Qingfei Jiang; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-06       Impact factor: 8.250

Review 3.  The eukaryotic replicative DNA polymerases take shape.

Authors:  Erik Johansson; Stuart A Macneill
Journal:  Trends Biochem Sci       Date:  2010-02-15       Impact factor: 13.807

Review 4.  How do Cdc7 and cyclin-dependent kinases trigger the initiation of chromosome replication in eukaryotic cells?

Authors:  Karim Labib
Journal:  Genes Dev       Date:  2010-06-15       Impact factor: 11.361

Review 5.  Single-molecule approaches to characterizing kinetics of biomolecular interactions.

Authors:  Antoine M van Oijen
Journal:  Curr Opin Biotechnol       Date:  2010-10-29       Impact factor: 9.740

Review 6.  Single-molecule studies of DNA replisome function.

Authors:  Senthil K Perumal; Hongjun Yue; Zhenxin Hu; Michelle M Spiering; Stephen J Benkovic
Journal:  Biochim Biophys Acta       Date:  2009-08-07

7.  Uncoupling of sister replisomes during eukaryotic DNA replication.

Authors:  Hasan Yardimci; Anna B Loveland; Satoshi Habuchi; Antoine M van Oijen; Johannes C Walter
Journal:  Mol Cell       Date:  2010-12-10       Impact factor: 17.970

8.  Postreplication gaps at UV lesions are signals for checkpoint activation.

Authors:  A John Callegari; Emily Clark; Amanda Pneuman; Thomas J Kelly
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-19       Impact factor: 11.205

9.  Stoichiometry and architecture of active DNA replication machinery in Escherichia coli.

Authors:  Rodrigo Reyes-Lamothe; David J Sherratt; Mark C Leake
Journal:  Science       Date:  2010-04-23       Impact factor: 47.728

10.  Co-directional replication-transcription conflicts lead to replication restart.

Authors:  Houra Merrikh; Cristina Machón; William H Grainger; Alan D Grossman; Panos Soultanas
Journal:  Nature       Date:  2011-02-24       Impact factor: 49.962

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  20 in total

1.  Function of the Plant DNA Polymerase Epsilon in Replicative Stress Sensing, a Genetic Analysis.

Authors:  José-Antonio Pedroza-García; Christelle Mazubert; Ivan Del Olmo; Mickael Bourge; Séverine Domenichini; Rémi Bounon; Zakia Tariq; Etienne Delannoy; Manuel Piñeiro; José A Jarillo; Catherine Bergounioux; Moussa Benhamed; Cécile Raynaud
Journal:  Plant Physiol       Date:  2017-02-02       Impact factor: 8.340

2.  Preventing bacterial suicide: a novel toxin-antitoxin strategy.

Authors:  Monica Markovski; Sue Wickner
Journal:  Mol Cell       Date:  2013-12-12       Impact factor: 17.970

3.  Binding Affinities among DNA Helicase-Primase, DNA Polymerase, and Replication Intermediates in the Replisome of Bacteriophage T7.

Authors:  Huidong Zhang; Yong Tang; Seung-Joo Lee; Zeliang Wei; Jia Cao; Charles C Richardson
Journal:  J Biol Chem       Date:  2015-11-30       Impact factor: 5.157

4.  Plasmid replication initiator interactions with origin 13-mers and polymerase subunits contribute to strand-specific replisome assembly.

Authors:  Aleksandra Wawrzycka; Marta Gross; Anna Wasaznik; Igor Konieczny
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

5.  Intrinsic stability and oligomerization dynamics of DNA processivity clamps.

Authors:  Jennifer K Binder; Lauren G Douma; Suman Ranjit; David M Kanno; Manas Chakraborty; Linda B Bloom; Marcia Levitus
Journal:  Nucleic Acids Res       Date:  2014-04-11       Impact factor: 16.971

6.  DnaC, the indispensable companion of DnaB helicase, controls the accessibility of DnaB helicase by primase.

Authors:  Magdalena M Felczak; Sundari Chodavarapu; Jon M Kaguni
Journal:  J Biol Chem       Date:  2017-10-25       Impact factor: 5.157

7.  Genetic Networks Required to Coordinate Chromosome Replication by DNA Polymerases α, δ, and ε in Saccharomyces cerevisiae.

Authors:  Marion Dubarry; Conor Lawless; A Peter Banks; Simon Cockell; David Lydall
Journal:  G3 (Bethesda)       Date:  2015-08-21       Impact factor: 3.154

8.  The roles of family B and D DNA polymerases in Thermococcus species 9°N Okazaki fragment maturation.

Authors:  Lucia Greenough; Zvi Kelman; Andrew F Gardner
Journal:  J Biol Chem       Date:  2015-03-26       Impact factor: 5.157

9.  DNA polymerase IV mediates efficient and quick recovery of replication forks stalled at N2-dG adducts.

Authors:  Mio Ikeda; Asako Furukohri; Gaelle Philippin; Edward Loechler; Masahiro Tatsumi Akiyama; Tsutomu Katayama; Robert P Fuchs; Hisaji Maki
Journal:  Nucleic Acids Res       Date:  2014-06-23       Impact factor: 16.971

10.  Comprehensive analysis of DNA polymerase III α subunits and their homologs in bacterial genomes.

Authors:  Kestutis Timinskas; Monika Balvočiūtė; Albertas Timinskas; Česlovas Venclovas
Journal:  Nucleic Acids Res       Date:  2013-10-07       Impact factor: 16.971

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