Literature DB >> 20396940

Causal relationships between frequency bands of extracellular signals in visual cortex revealed by an information theoretic analysis.

Michel Besserve1, Bernhard Schölkopf, Nikos K Logothetis, Stefano Panzeri.   

Abstract

Characterizing how different cortical rhythms interact and how their interaction changes with sensory stimulation is important to gather insights into how these rhythms are generated and what sensory function they may play. Concepts from information theory, such as Transfer Entropy (TE), offer principled ways to quantify the amount of causation between different frequency bands of the signal recorded from extracellular electrodes; yet these techniques are hard to apply to real data. To address the above issues, in this study we develop a method to compute fast and reliably the amount of TE from experimental time series of extracellular potentials. The method consisted in adapting efficiently the calculation of TE to analog signals and in providing appropriate sampling bias corrections. We then used this method to quantify the strength and significance of causal interaction between frequency bands of field potentials and spikes recorded from primary visual cortex of anaesthetized macaques, both during spontaneous activity and during binocular presentation of naturalistic color movies. Causal interactions between different frequency bands were prominent when considering the signals at a fine (ms) temporal resolution, and happened with a very short (ms-scale) delay. The interactions were much less prominent and significant at coarser temporal resolutions. At high temporal resolution, we found strong bidirectional causal interactions between gamma-band (40-100 Hz) and slower field potentials when considering signals recorded within a distance of 2 mm. The interactions involving gamma bands signals were stronger during movie presentation than in absence of stimuli, suggesting a strong role of the gamma cycle in processing naturalistic stimuli. Moreover, the phase of gamma oscillations was playing a stronger role than their amplitude in increasing causations with slower field potentials and spikes during stimulation. The dominant direction of causality was mainly found in the direction from MUA or gamma frequency band signals to lower frequency signals, suggesting that hierarchical correlations between lower and higher frequency cortical rhythms are originated by the faster rhythms.

Entities:  

Mesh:

Year:  2010        PMID: 20396940      PMCID: PMC2978901          DOI: 10.1007/s10827-010-0236-5

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  51 in total

Review 1.  The underpinnings of the BOLD functional magnetic resonance imaging signal.

Authors:  Nikos K Logothetis
Journal:  J Neurosci       Date:  2003-05-15       Impact factor: 6.167

2.  Interdependence of EEG signals: linear vs. nonlinear associations and the significance of time delays and phase shifts.

Authors:  F Lopes da Silva; J P Pijn; P Boeijinga
Journal:  Brain Topogr       Date:  1989 Fall-Winter       Impact factor: 3.020

3.  A comparison of random field theory and permutation methods for the statistical analysis of MEG data.

Authors:  Dimitrios Pantazis; Thomas E Nichols; Sylvain Baillet; Richard M Leahy
Journal:  Neuroimage       Date:  2005-04-01       Impact factor: 6.556

4.  Evaluating information transfer between auditory cortical neurons.

Authors:  Boris Gourévitch; Jos J Eggermont
Journal:  J Neurophysiol       Date:  2007-01-03       Impact factor: 2.714

5.  An invariance property of predictors in kernel-induced hypothesis spaces.

Authors:  Nicola Ancona; Sebastiano Stramaglia
Journal:  Neural Comput       Date:  2006-04       Impact factor: 2.026

6.  Low-frequency local field potentials and spikes in primary visual cortex convey independent visual information.

Authors:  Andrei Belitski; Arthur Gretton; Cesare Magri; Yusuke Murayama; Marcelo A Montemurro; Nikos K Logothetis; Stefano Panzeri
Journal:  J Neurosci       Date:  2008-05-28       Impact factor: 6.167

7.  Oscillatory responses in cat visual cortex exhibit inter-columnar synchronization which reflects global stimulus properties.

Authors:  C M Gray; P König; A K Engel; W Singer
Journal:  Nature       Date:  1989-03-23       Impact factor: 49.962

8.  Properties of the evoked potential generators: current source-density analysis of visually evoked potentials in the cat cortex.

Authors:  U Mitzdorf
Journal:  Int J Neurosci       Date:  1987-03       Impact factor: 2.292

9.  Analytical estimates of limited sampling biases in different information measures.

Authors:  Stefano Panzeri; Alessandro Treves
Journal:  Network       Date:  1996       Impact factor: 1.273

10.  Temporal Interactions between Cortical Rhythms.

Authors:  Anita K Roopun; Mark A Kramer; Lucy M Carracedo; Marcus Kaiser; Ceri H Davies; Roger D Traub; Nancy J Kopell; Miles A Whittington
Journal:  Front Neurosci       Date:  2008-12-15       Impact factor: 4.677

View more
  27 in total

Review 1.  Modelling and analysis of local field potentials for studying the function of cortical circuits.

Authors:  Gaute T Einevoll; Christoph Kayser; Nikos K Logothetis; Stefano Panzeri
Journal:  Nat Rev Neurosci       Date:  2013-11       Impact factor: 34.870

2.  Infragranular layers lead information flow during slow oscillations according to information directionality indicators.

Authors:  J M Amigó; R Monetti; N Tort-Colet; M V Sanchez-Vives
Journal:  J Comput Neurosci       Date:  2015-05-14       Impact factor: 1.621

3.  A method for decomposing multivariate time series into a causal hierarchy within specific frequency bands.

Authors:  Jonathan D Drover; Nicholas D Schiff
Journal:  J Comput Neurosci       Date:  2018-07-30       Impact factor: 1.621

4.  Adaptive spike-artifact removal from local field potentials uncovers prominent beta and gamma band neuronal synchronization.

Authors:  Kianoush Banaie Boroujeni; Paul Tiesinga; Thilo Womelsdorf
Journal:  J Neurosci Methods       Date:  2019-11-06       Impact factor: 2.390

5.  Measuring spectrally-resolved information transfer.

Authors:  Edoardo Pinzuti; Patricia Wollstadt; Aaron Gutknecht; Oliver Tüscher; Michael Wibral
Journal:  PLoS Comput Biol       Date:  2020-12-28       Impact factor: 4.475

6.  Estimating causal interaction between prefrontal cortex and striatum by transfer entropy.

Authors:  Chaofei Ma; Xiaochuan Pan; Rubin Wang; Masamichi Sakagami
Journal:  Cogn Neurodyn       Date:  2013-01-04       Impact factor: 5.082

7.  Improved measures of phase-coupling between spikes and the Local Field Potential.

Authors:  Martin Vinck; Francesco Paolo Battaglia; Thilo Womelsdorf; Cyriel Pennartz
Journal:  J Comput Neurosci       Date:  2011-12-21       Impact factor: 1.621

8.  Frequency-band signatures of visual responses to naturalistic input in ferret primary visual cortex during free viewing.

Authors:  Kristin K Sellers; Davis V Bennett; Flavio Fröhlich
Journal:  Brain Res       Date:  2014-12-12       Impact factor: 3.252

9.  Model-free reconstruction of excitatory neuronal connectivity from calcium imaging signals.

Authors:  Olav Stetter; Demian Battaglia; Jordi Soriano; Theo Geisel
Journal:  PLoS Comput Biol       Date:  2012-08-23       Impact factor: 4.475

10.  Algorithms of causal inference for the analysis of effective connectivity among brain regions.

Authors:  Daniel Chicharro; Stefano Panzeri
Journal:  Front Neuroinform       Date:  2014-07-02       Impact factor: 4.081

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.