Literature DB >> 33370259

Measuring spectrally-resolved information transfer.

Edoardo Pinzuti1, Patricia Wollstadt2, Aaron Gutknecht3, Oliver Tüscher1,4, Michael Wibral2,3.   

Abstract

Information transfer, measured by transfer entropy, is a key component of distributed computation. It is therefore important to understand the pattern of information transfer in order to unravel the distributed computational algorithms of a system. Since in many natural systems distributed computation is thought to rely on rhythmic processes a frequency resolved measure of information transfer is highly desirable. Here, we present a novel algorithm, and its efficient implementation, to identify separately frequencies sending and receiving information in a network. Our approach relies on the invertible maximum overlap discrete wavelet transform (MODWT) for the creation of surrogate data in the computation of transfer entropy and entirely avoids filtering of the original signals. The approach thereby avoids well-known problems due to phase shifts or the ineffectiveness of filtering in the information theoretic setting. We also show that measuring frequency-resolved information transfer is a partial information decomposition problem that cannot be fully resolved to date and discuss the implications of this issue. Last, we evaluate the performance of our algorithm on simulated data and apply it to human magnetoencephalography (MEG) recordings and to local field potential recordings in the ferret. In human MEG we demonstrate top-down information flow in temporal cortex from very high frequencies (above 100Hz) to both similarly high frequencies and to frequencies around 20Hz, i.e. a complex spectral configuration of cortical information transmission that has not been described before. In the ferret we show that the prefrontal cortex sends information at low frequencies (4-8 Hz) to early visual cortex (V1), while V1 receives the information at high frequencies (> 125 Hz).

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Year:  2020        PMID: 33370259      PMCID: PMC7793276          DOI: 10.1371/journal.pcbi.1008526

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  33 in total

1.  Granger causality and transfer entropy are equivalent for Gaussian variables.

Authors:  Lionel Barnett; Adam B Barrett; Anil K Seth
Journal:  Phys Rev Lett       Date:  2009-12-04       Impact factor: 9.161

2.  Confounding effects of indirect connections on causality estimation.

Authors:  Vasily A Vakorin; Olga A Krakovska; Anthony R McIntosh
Journal:  J Neurosci Methods       Date:  2009-07-21       Impact factor: 2.390

3.  Analyzing information flow in brain networks with nonparametric Granger causality.

Authors:  Mukeshwar Dhamala; Govindan Rangarajan; Mingzhou Ding
Journal:  Neuroimage       Date:  2008-02-25       Impact factor: 6.556

4.  Information-Theoretic Evidence for Predictive Coding in the Face-Processing System.

Authors:  Alla Brodski-Guerniero; Georg-Friedrich Paasch; Patricia Wollstadt; Ipek Özdemir; Joseph T Lizier; Michael Wibral
Journal:  J Neurosci       Date:  2017-07-27       Impact factor: 6.167

5.  Disharmony in neural oscillations.

Authors:  Alexandre Hyafil
Journal:  J Neurophysiol       Date:  2017-02-08       Impact factor: 2.714

6.  Multiscale Granger causality.

Authors:  Luca Faes; Giandomenico Nollo; Sebastiano Stramaglia; Daniele Marinazzo
Journal:  Phys Rev E       Date:  2017-10-25       Impact factor: 2.529

7.  Causal relationships between frequency bands of extracellular signals in visual cortex revealed by an information theoretic analysis.

Authors:  Michel Besserve; Bernhard Schölkopf; Nikos K Logothetis; Stefano Panzeri
Journal:  J Comput Neurosci       Date:  2010-04-16       Impact factor: 1.621

8.  Choosing Wavelet Methods, Filters, and Lengths for Functional Brain Network Construction.

Authors:  Zitong Zhang; Qawi K Telesford; Chad Giusti; Kelvin O Lim; Danielle S Bassett
Journal:  PLoS One       Date:  2016-06-29       Impact factor: 3.240

9.  The influence of filtering and downsampling on the estimation of transfer entropy.

Authors:  Immo Weber; Esther Florin; Michael von Papen; Lars Timmermann
Journal:  PLoS One       Date:  2017-11-17       Impact factor: 3.240

10.  Measuring information-transfer delays.

Authors:  Michael Wibral; Nicolae Pampu; Viola Priesemann; Felix Siebenhühner; Hannes Seiwert; Michael Lindner; Joseph T Lizier; Raul Vicente
Journal:  PLoS One       Date:  2013-02-28       Impact factor: 3.240

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