Literature DB >> 20356839

Mechanism of eIF6-mediated inhibition of ribosomal subunit joining.

Marco Gartmann1, Michael Blau, Jean-Paul Armache, Thorsten Mielke, Maya Topf, Roland Beckmann.   

Abstract

During the process of ribosomal assembly, the essential eukaryotic translation initiation factor 6 (eIF6) is known to act as a ribosomal anti-association factor. However, a molecular understanding of the anti-association activity of eIF6 is still missing. Here we present the cryo-electron microscopy reconstruction of a complex of the large ribosomal subunit with eukaryotic eIF6 from Saccharomyces cerevisiae. The structure reveals that the eIF6 binding site involves mainly rpL23 (L14p in Escherichia coli). Based on our structural data, we propose that the mechanism of the anti-association activity of eIF6 is based on steric hindrance of intersubunit bridge formation around the dynamic bridge B6.

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Year:  2010        PMID: 20356839      PMCID: PMC2865328          DOI: 10.1074/jbc.C109.096057

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  26 in total

1.  Crystal structures of ribosome anti-association factor IF6.

Authors:  C M Groft; R Beckmann; A Sali; S K Burley
Journal:  Nat Struct Biol       Date:  2000-12

2.  Accurate determination of local defocus and specimen tilt in electron microscopy.

Authors:  Joseph A Mindell; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2003-06       Impact factor: 2.867

3.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

4.  Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation.

Authors:  Christian M T Spahn; Maria G Gomez-Lorenzo; Robert A Grassucci; Rene Jørgensen; Gregers R Andersen; Roland Beckmann; Pawel A Penczek; Juan P G Ballesta; Joachim Frank
Journal:  EMBO J       Date:  2004-02-19       Impact factor: 11.598

5.  Purification and characterization of a ribosome dissociation factor (eukaryotic initiation factor 6) from wheat germ.

Authors:  D W Russell; L L Spremulli
Journal:  J Biol Chem       Date:  1979-09-25       Impact factor: 5.157

6.  The nucle(ol)ar Tif6p and Efl1p are required for a late cytoplasmic step of ribosome synthesis.

Authors:  B Senger; D L Lafontaine; J S Graindorge; O Gadal; A Camasses; A Sanni; J M Garnier; M Breitenbach; E Hurt; F Fasiolo
Journal:  Mol Cell       Date:  2001-12       Impact factor: 17.970

7.  Release of eIF6 (p27BBP) from the 60S subunit allows 80S ribosome assembly.

Authors:  Marcello Ceci; Cristina Gaviraghi; Chiara Gorrini; Leonardo A Sala; Nina Offenhäuser; Pier Carlo Marchisio; Stefano Biffo
Journal:  Nature       Date:  2003-12-04       Impact factor: 49.962

8.  Role of the yeast Rrp1 protein in the dynamics of pre-ribosome maturation.

Authors:  Edward W Horsey; Jelena Jakovljevic; Tiffany D Miles; Piyanun Harnpicharnchai; John L Woolford
Journal:  RNA       Date:  2004-05       Impact factor: 4.942

9.  Phosphorylation of mammalian eukaryotic translation initiation factor 6 and its Saccharomyces cerevisiae homologue Tif6p: evidence that phosphorylation of Tif6p regulates its nucleocytoplasmic distribution and is required for yeast cell growth.

Authors:  Uttiya Basu; Kausik Si; Haiteng Deng; Umadas Maitra
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

Review 10.  Eukaryotic initiation factor 6 mediates a continuum between 60S ribosome biogenesis and translation.

Authors:  Annarita Miluzio; Anne Beugnet; Viviana Volta; Stefano Biffo
Journal:  EMBO Rep       Date:  2009-04-17       Impact factor: 8.807

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  59 in total

1.  Cryo-EM structure of the archaeal 50S ribosomal subunit in complex with initiation factor 6 and implications for ribosome evolution.

Authors:  Basil J Greber; Daniel Boehringer; Vlatka Godinic-Mikulcic; Ana Crnkovic; Michael Ibba; Ivana Weygand-Durasevic; Nenad Ban
Journal:  J Mol Biol       Date:  2012-01-27       Impact factor: 5.469

Review 2.  mRNA helicases: the tacticians of translational control.

Authors:  Armen Parsyan; Yuri Svitkin; David Shahbazian; Christos Gkogkas; Paul Lasko; William C Merrick; Nahum Sonenberg
Journal:  Nat Rev Mol Cell Biol       Date:  2011-04       Impact factor: 94.444

3.  Dissociation by Pelota, Hbs1 and ABCE1 of mammalian vacant 80S ribosomes and stalled elongation complexes.

Authors:  Vera P Pisareva; Maxim A Skabkin; Christopher U T Hellen; Tatyana V Pestova; Andrey V Pisarev
Journal:  EMBO J       Date:  2011-03-29       Impact factor: 11.598

4.  Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis.

Authors:  Andrey G Malyutin; Sharmishtha Musalgaonkar; Stephanie Patchett; Joachim Frank; Arlen W Johnson
Journal:  EMBO J       Date:  2017-02-08       Impact factor: 11.598

5.  Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.

Authors:  Kai-Yin Lo; Zhihua Li; Cyril Bussiere; Stefan Bresson; Edward M Marcotte; Arlen W Johnson
Journal:  Mol Cell       Date:  2010-07-30       Impact factor: 17.970

6.  Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit.

Authors:  Basil J Greber; Daniel Boehringer; Christian Montellese; Nenad Ban
Journal:  Nat Struct Mol Biol       Date:  2012-11-11       Impact factor: 15.369

7.  Structure of Ribosomal Silencing Factor Bound to Mycobacterium tuberculosis Ribosome.

Authors:  Xiaojun Li; Qingan Sun; Cai Jiang; Kailu Yang; Li-Wei Hung; Junjie Zhang; James C Sacchettini
Journal:  Structure       Date:  2015-08-20       Impact factor: 5.006

8.  Atomic modeling of the ITS2 ribosome assembly subcomplex from cryo-EM together with mass spectrometry-identified protein-protein crosslinks.

Authors:  Shan Wu; Dan Tan; John L Woolford; Meng-Qiu Dong; Ning Gao
Journal:  Protein Sci       Date:  2016-10-13       Impact factor: 6.725

Review 9.  Ribosome biogenesis in the yeast Saccharomyces cerevisiae.

Authors:  John L Woolford; Susan J Baserga
Journal:  Genetics       Date:  2013-11       Impact factor: 4.562

Review 10.  Quality control mechanisms during ribosome maturation.

Authors:  Katrin Karbstein
Journal:  Trends Cell Biol       Date:  2013-02-01       Impact factor: 20.808

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