Literature DB >> 20299257

A non-uniformly sampled 4D HCC(CO)NH-TOCSY experiment processed using maximum entropy for rapid protein sidechain assignment.

Mehdi Mobli1, Alan S Stern, Wolfgang Bermel, Glenn F King, Jeffrey C Hoch.   

Abstract

One of the stiffest challenges in structural studies of proteins using NMR is the assignment of sidechain resonances. Typically, a panel of lengthy 3D experiments are acquired in order to establish connectivities and resolve ambiguities due to overlap. We demonstrate that these experiments can be replaced by a single 4D experiment that is time-efficient, yields excellent resolution, and captures unique carbon-proton connectivity information. The approach is made practical by the use of non-uniform sampling in the three indirect time dimensions and maximum entropy reconstruction of the corresponding 3D frequency spectrum. This 4D method will facilitate automated resonance assignment procedures and it should be particularly beneficial for increasing throughput in NMR-based structural genomics initiatives. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20299257      PMCID: PMC2859963          DOI: 10.1016/j.jmr.2010.02.012

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  22 in total

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2.  Accelerated acquisition of high resolution triple-resonance spectra using non-uniform sampling and maximum entropy reconstruction.

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3.  Spectral reconstruction methods in fast NMR: reduced dimensionality, random sampling and maximum entropy.

Authors:  Mehdi Mobli; Alan S Stern; Jeffrey C Hoch
Journal:  J Magn Reson       Date:  2006-07-11       Impact factor: 2.229

4.  Maximum Entropy Spectral Reconstruction of Non-Uniformly Sampled Data.

Authors:  Mehdi Mobli; Jeffrey C Hoch
Journal:  Concepts Magn Reson Part A Bridg Educ Res       Date:  2008-11-01       Impact factor: 0.481

Review 5.  Decoupling: theory and practice. I. Current methods and recent concepts.

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  26 in total

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Journal:  J Magn Reson       Date:  2011-01-04       Impact factor: 2.229

2.  Nonuniform sampling and maximum entropy reconstruction in multidimensional NMR.

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8.  A time-saving strategy for MAS NMR spectroscopy by combining nonuniform sampling and paramagnetic relaxation assisted condensed data collection.

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10.  Non-Uniform Sampling and J-UNIO Automation for Efficient Protein NMR Structure Determination.

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