| Literature DB >> 26227870 |
Tatiana Didenko1,2,3, Andrew Proudfoot1,2, Samit Kumar Dutta1,2, Pedro Serrano1,2, Kurt Wüthrich4,5,6,7.
Abstract
High-resolution structure determination of small proteins in solution is one of the big assets of NMR spectroscopy in structural biology. Improvements in the efficiency of NMR structure determination by advances in NMR experiments and automation of data handling therefore attracts continued interest. Here, non-uniform sampling (NUS) of 3D heteronuclear-resolved [(1)H,(1)H]-NOESY data yielded two- to three-fold savings of instrument time for structure determinations of soluble proteins. With the 152-residue protein NP_372339.1 from Staphylococcus aureus and the 71-residue protein NP_346341.1 from Streptococcus pneumonia we show that high-quality structures can be obtained with NUS NMR data, which are equally well amenable to robust automated analysis as the corresponding uniformly sampled data.Entities:
Keywords: J-UNIO structure determination protocol; NMR spectroscopy; automated data analysis; compressed sensing; proteins
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Year: 2015 PMID: 26227870 PMCID: PMC4576834 DOI: 10.1002/chem.201502544
Source DB: PubMed Journal: Chemistry ISSN: 0947-6539 Impact factor: 5.236