Literature DB >> 20231865

The comparison of alternative smoothing methods for fitting non-linear exposure-response relationships with Cox models in a simulation study.

Usha S Govindarajulu1, Elizabeth J Malloy, Bhaswati Ganguli, Donna Spiegelman, Ellen A Eisen.   

Abstract

We examined the behavior of alternative smoothing methods for modeling environmental epidemiology data. Model fit can only be examined when the true exposure-response curve is known and so we used simulation studies to examine the performance of penalized splines (P-splines), restricted cubic splines (RCS), natural splines (NS), and fractional polynomials (FP). Survival data were generated under six plausible exposure-response scenarios with a right skewed exposure distribution, typical of environmental exposures. Cox models with each spline or FP were fit to simulated datasets. The best models, e.g. degrees of freedom, were selected using default criteria for each method. The root mean-square error (rMSE) and area difference were computed to assess model fit and bias (difference between the observed and true curves). The test for linearity was a measure of sensitivity and the test of the null was an assessment of statistical power. No one method performed best according to all four measures of performance, however, all methods performed reasonably well. The model fit was best for P-splines for almost all true positive scenarios, although fractional polynomials and RCS were least biased, on average.

Entities:  

Mesh:

Year:  2009        PMID: 20231865      PMCID: PMC2827890          DOI: 10.2202/1557-4679.1104

Source DB:  PubMed          Journal:  Int J Biostat        ISSN: 1557-4679            Impact factor:   0.968


  12 in total

Review 1.  A practical guide to dose-response analyses and risk assessment in occupational epidemiology.

Authors:  Kyle Steenland; James A Deddens
Journal:  Epidemiology       Date:  2004-01       Impact factor: 4.822

2.  Inference for the proportional hazards model with misclassified discrete-valued covariates.

Authors:  David M Zucker; Donna Spiegelman
Journal:  Biometrics       Date:  2004-06       Impact factor: 2.571

3.  Flexible regression models with cubic splines.

Authors:  S Durrleman; R Simon
Journal:  Stat Med       Date:  1989-05       Impact factor: 2.373

4.  Radon epidemiology: continuous and categorical trend estimators when the exposure distribution is skewed and outliers may be present.

Authors:  Angelika Schaffrath Rosario; Jürgen Wellmann; Iris M Heid; H-Erich Wichmann
Journal:  J Toxicol Environ Health A       Date:  2006-04

5.  Comparing smoothing techniques in Cox models for exposure-response relationships.

Authors:  Usha S Govindarajulu; Donna Spiegelman; Sally W Thurston; Bhaswati Ganguli; Ellen A Eisen
Journal:  Stat Med       Date:  2007-09-10       Impact factor: 2.373

6.  Assessing interactions of binary time-dependent covariates with time in cox proportional hazards regression models using cubic spline functions.

Authors:  H Heinzl; A Kaider; G Zlabinger
Journal:  Stat Med       Date:  1996-12-15       Impact factor: 2.373

Review 7.  Regression models in clinical studies: determining relationships between predictors and response.

Authors:  F E Harrell; K L Lee; B G Pollock
Journal:  J Natl Cancer Inst       Date:  1988-10-05       Impact factor: 13.506

Review 8.  Statistical methods in cancer research. Volume II--The design and analysis of cohort studies.

Authors:  N E Breslow; N E Day
Journal:  IARC Sci Publ       Date:  1987

9.  Assessing time-by-covariate interactions in proportional hazards regression models using cubic spline functions.

Authors:  K R Hess
Journal:  Stat Med       Date:  1994-05-30       Impact factor: 2.373

10.  Dose-response associations of silica with nonmalignant respiratory disease and lung cancer mortality in the diatomaceous earth industry.

Authors:  H Checkoway; N J Heyer; N S Seixas; E A Welp; P A Demers; J M Hughes; H Weill
Journal:  Am J Epidemiol       Date:  1997-04-15       Impact factor: 4.897

View more
  36 in total

1.  Alcohol consumption and risk of stroke in women.

Authors:  Monik Jimenez; Stephanie E Chiuve; Robert J Glynn; Meir J Stampfer; Carlos A Camargo; Walter C Willett; Joann E Manson; Kathryn M Rexrode
Journal:  Stroke       Date:  2012-03-08       Impact factor: 7.914

2.  Circulating fetuin-A and risk of ischemic stroke in women.

Authors:  Monik C Jiménez; Qi Sun; Markus Schürks; Frank B Hu; Joann E Manson; Kathryn M Rexrode
Journal:  Clin Chem       Date:  2013-10-29       Impact factor: 8.327

3.  Dyslipidemia in an HIV-positive antiretroviral treatment-naive population in Dar es Salaam, Tanzania.

Authors:  Catharina Armstrong; Enju Liu; James Okuma; Donna Spiegelman; Chalamilla Guerino; Marina Njelekela; Steve Grinspoon; Wafaie Fawzi; Claudia Hawkins
Journal:  J Acquir Immune Defic Syndr       Date:  2011-06-01       Impact factor: 3.731

4.  Learning curve estimation in medical devices and procedures: hierarchical modeling.

Authors:  Usha S Govindarajulu; Marco Stillo; David Goldfarb; Michael E Matheny; Frederic S Resnic
Journal:  Stat Med       Date:  2017-05-03       Impact factor: 2.373

5.  Evaluating Public Health Interventions: 8. Causal Inference for Time-Invariant Interventions.

Authors:  Donna Spiegelman; Xin Zhou
Journal:  Am J Public Health       Date:  2018-07-19       Impact factor: 9.308

6.  Calcium intake and bone mineral density as an example of non-linearity and threshold analysis.

Authors:  L P Breitling
Journal:  Osteoporos Int       Date:  2015-01-31       Impact factor: 4.507

Review 7.  Dairy products and pancreatic cancer risk: a pooled analysis of 14 cohort studies.

Authors:  J M Genkinger; M Wang; R Li; D Albanes; K E Anderson; L Bernstein; P A van den Brandt; D R English; J L Freudenheim; C S Fuchs; S M Gapstur; G G Giles; R A Goldbohm; N Håkansson; P L Horn-Ross; A Koushik; J R Marshall; M L McCullough; A B Miller; K Robien; T E Rohan; C Schairer; D T Silverman; R Z Stolzenberg-Solomon; J Virtamo; W C Willett; A Wolk; R G Ziegler; S A Smith-Warner
Journal:  Ann Oncol       Date:  2014-03-14       Impact factor: 32.976

8.  Uric Acid and the Risks of Kidney Failure and Death in Individuals With CKD.

Authors:  Anand Srivastava; Arnaud D Kaze; Ciaran J McMullan; Tamara Isakova; Sushrut S Waikar
Journal:  Am J Kidney Dis       Date:  2017-11-11       Impact factor: 8.860

9.  Dietary Patterns and Plasma Sex Hormones, Prolactin, and Sex Hormone-Binding Globulin in Premenopausal Women.

Authors:  Kelly A Hirko; Donna Spiegelman; Junaidah B Barnett; Eunyoung Cho; Walter C Willett; Susan E Hankinson; A Heather Eliassen
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2016-03-15       Impact factor: 4.254

10.  Stunting and wasting are associated with poorer psychomotor and mental development in HIV-exposed Tanzanian infants.

Authors:  Christine M McDonald; Karim P Manji; Roland Kupka; David C Bellinger; Donna Spiegelman; Rodrick Kisenge; Gernard Msamanga; Wafaie W Fawzi; Christopher P Duggan
Journal:  J Nutr       Date:  2012-12-19       Impact factor: 4.798

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.