Literature DB >> 23459127

An engineered heme-copper center in myoglobin: CO migration and binding.

Karin Nienhaus1, John S Olson, G Ulrich Nienhaus.   

Abstract

We have investigated CO migration and binding in CuBMb, a copper-binding myoglobin double mutant (L29H-F43H), by using Fourier transform infrared spectroscopy and flash photolysis over a wide temperature range. This mutant was originally engineered with the aim to mimic the catalytic site of heme-copper oxidases. Comparison of the wild-type protein Mb and CuBMb shows that the copper ion in the distal pocket gives rise to significant effects on ligand binding to the heme iron. In Mb and copper-free CuBMb, primary and secondary ligand docking sites are accessible upon photodissociation. In copper-bound CuBMb, ligands do not migrate to secondary docking sites but rather coordinate to the copper ion. Ligands entering the heme pocket from the outside normally would not be captured efficiently by the tight distal pocket housing the two additional large imidazole rings. Binding at the Cu ion, however, ensures efficient trapping in CuBMb. The Cu ion also restricts the motions of the His64 side chain, which is the entry/exit door for ligand movement into the active site, and this restriction results in enhanced geminate and slow bimolecular CO rebinding. These results support current mechanistic views of ligand binding in hemoglobins and the role of the CuB in the active of heme-copper oxidases. This article is part of a Special Issue entitled: Oxygen Binding and Sensing Proteins.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cu(B)Mb; FTIR; Fourier transform infrared; Fourier transform infrared spectroscopy; HCO; Heme protein; Ligand binding; Ligand migration; Mb; Photolysis difference spectroscopy; TDS; Temperature derivative spectroscopy; copper-binding Mb mutant L29H–F43H; heme–copper oxidase; myoglobin; temperature derivative spectroscopy

Mesh:

Substances:

Year:  2013        PMID: 23459127      PMCID: PMC3687040          DOI: 10.1016/j.bbapap.2013.02.031

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  71 in total

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5.  Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO.

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Journal:  Biochim Biophys Acta       Date:  2011-12-27

8.  Ligand binding to heme proteins: III. FTIR studies of His-E7 and Val-E11 mutants of carbonmonoxymyoglobin.

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Journal:  Biophys J       Date:  1993-12       Impact factor: 4.033

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Authors:  Fritz G Parak; G Ulrich Nienhaus
Journal:  Chemphyschem       Date:  2002-03-12       Impact factor: 3.102

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  1 in total

Review 1.  Molecular understanding of heteronuclear active sites in heme-copper oxidases, nitric oxide reductases, and sulfite reductases through biomimetic modelling.

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  1 in total

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