Literature DB >> 20025250

Nonlinear optical imaging of integral membrane protein crystals in lipidic mesophases.

David J Kissick1, Ellen J Gualtieri, Garth J Simpson, Vadim Cherezov.   

Abstract

Second-order nonlinear optical imaging of chiral crystals (SONICC) is explored for selective detection of integral membrane protein crystals grown in opaque and turbid environments. High turbidity is a hallmark of membrane protein crystallization due to the extensive use of detergent and/or lipids that often form various mesophases. Detection of crystals in such media by conventional optical methods (e.g., intrinsic UV fluorescence, birefringence, bright-field image analysis, etc.) is often complicated by optical scattering and by the small sizes of the crystals that routinely form. SONICC is shown to be well-suited for this application, by nature of its compatibility with imaging in scattering media and its high selectivity for protein crystals. Bright second harmonic generation (SHG) (up to 18 million counts/s) was observed from even relatively small crystals (5 mum) with a minimal background due to the surrounding lipid mesophase ( approximately 1 thousand counts/s). The low background nature of the resulting protein crystal images permitted the use of a relatively simple, particle counting analysis for preliminary scoring. Comparisons between a particle counting analysis of SONICC images and protocols based on the human expert analysis of conventional bright-field and birefringence images were performed.

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Year:  2010        PMID: 20025250      PMCID: PMC2825164          DOI: 10.1021/ac902139w

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  20 in total

Review 1.  A lipid's eye view of membrane protein crystallization in mesophases.

Authors:  M Caffrey
Journal:  Curr Opin Struct Biol       Date:  2000-08       Impact factor: 6.809

Review 2.  Towards the automated evaluation of crystallization trials.

Authors:  Julie Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

3.  Automatic classification of sub-microlitre protein-crystallization trials in 1536-well plates.

Authors:  Christian A Cumbaa; Angela Lauricella; Nancy Fehrman; Christina Veatch; Robert Collins; Joe Luft; George DeTitta; Igor Jurisica
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-08-19

4.  Assessing crystallization droplets using birefringence.

Authors:  A Echalier; R L Glazer; V Fülöp; M A Geday
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-03-23

5.  Lipidic sponge phase crystallization of membrane proteins.

Authors:  Pia Wadsten; Annemarie B Wöhri; Arjan Snijder; Gergely Katona; Alastair T Gardiner; Richard J Cogdell; Richard Neutze; Sven Engström
Journal:  J Mol Biol       Date:  2006-07-07       Impact factor: 5.469

6.  High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor.

Authors:  Vadim Cherezov; Daniel M Rosenbaum; Michael A Hanson; Søren G F Rasmussen; Foon Sun Thian; Tong Sun Kobilka; Hee-Jung Choi; Peter Kuhn; William I Weis; Brian K Kobilka; Raymond C Stevens
Journal:  Science       Date:  2007-10-25       Impact factor: 47.728

7.  Trace fluorescent labeling for high-throughput crystallography.

Authors:  Elizabeth Forsythe; Aniruddha Achari; Marc L Pusey
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-02-22

8.  Selective detection of protein crystals by second harmonic microscopy.

Authors:  Ronald D Wampler; David J Kissick; Christopher J Dehen; Ellen J Gualtieri; Jessica L Grey; Hai-Feng Wang; David H Thompson; Ji-Xin Cheng; Garth J Simpson
Journal:  J Am Chem Soc       Date:  2008-10-03       Impact factor: 15.419

9.  The 2.6 angstrom crystal structure of a human A2A adenosine receptor bound to an antagonist.

Authors:  Veli-Pekka Jaakola; Mark T Griffith; Michael A Hanson; Vadim Cherezov; Ellen Y T Chien; J Robert Lane; Adriaan P Ijzerman; Raymond C Stevens
Journal:  Science       Date:  2008-10-02       Impact factor: 47.728

10.  Image-based crystal detection: a machine-learning approach.

Authors:  Roy Liu; Yoav Freund; Glen Spraggon
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-11-18
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  42 in total

1.  Detection of membrane protein two-dimensional crystals in living cells.

Authors:  E J Gualtieri; F Guo; D J Kissick; J Jose; R J Kuhn; W Jiang; G J Simpson
Journal:  Biophys J       Date:  2011-01-05       Impact factor: 4.033

Review 2.  Femtosecond nanocrystallography using X-ray lasers for membrane protein structure determination.

Authors:  Petra Fromme; John C H Spence
Journal:  Curr Opin Struct Biol       Date:  2011-08       Impact factor: 6.809

3.  Two-photon excited UV fluorescence for protein crystal detection.

Authors:  Jeremy T Madden; Emma L DeWalt; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-09-08

4.  Intercalating dyes for enhanced contrast in second-harmonic generation imaging of protein crystals.

Authors:  Justin A Newman; Nicole M Scarborough; Nicholas R Pogranichniy; Rashmi K Shrestha; Richard G Closser; Chittaranjan Das; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-06-30

5.  Dynamic X-ray diffraction sampling for protein crystal positioning.

Authors:  Nicole M Scarborough; G M Dilshan P Godaliyadda; Dong Hye Ye; David J Kissick; Shijie Zhang; Justin A Newman; Michael J Sheedlo; Azhad U Chowdhury; Robert F Fischetti; Chittaranjan Das; Gregery T Buzzard; Charles A Bouman; Garth J Simpson
Journal:  J Synchrotron Radiat       Date:  2017-01-01       Impact factor: 2.616

6.  Polarization-resolved second-harmonic generation microscopy as a method to visualize protein-crystal domains.

Authors:  Emma L DeWalt; Victoria J Begue; Judith A Ronau; Shane Z Sullivan; Chittaranjan Das; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-12-20

7.  Towards protein-crystal centering using second-harmonic generation (SHG) microscopy.

Authors:  David J Kissick; Christopher M Dettmar; Michael Becker; Anne M Mulichak; Vadim Cherezov; Stephan L Ginell; Kevin P Battaile; Lisa J Keefe; Robert F Fischetti; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-04-19

8.  Guiding synchrotron X-ray diffraction by multimodal video-rate protein crystal imaging.

Authors:  Justin A Newman; Shijie Zhang; Shane Z Sullivan; Ximeng Y Dow; Michael Becker; Michael J Sheedlo; Sergey Stepanov; Mark S Carlsen; R Michael Everly; Chittaranjan Das; Robert F Fischetti; Garth J Simpson
Journal:  J Synchrotron Radiat       Date:  2016-05-16       Impact factor: 2.616

9.  Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography.

Authors:  Uwe Weierstall; Daniel James; Chong Wang; Thomas A White; Dingjie Wang; Wei Liu; John C H Spence; R Bruce Doak; Garrett Nelson; Petra Fromme; Raimund Fromme; Ingo Grotjohann; Christopher Kupitz; Nadia A Zatsepin; Haiguang Liu; Shibom Basu; Daniel Wacker; Gye Won Han; Vsevolod Katritch; Sébastien Boutet; Marc Messerschmidt; Garth J Williams; Jason E Koglin; M Marvin Seibert; Markus Klinker; Cornelius Gati; Robert L Shoeman; Anton Barty; Henry N Chapman; Richard A Kirian; Kenneth R Beyerlein; Raymond C Stevens; Dianfan Li; Syed T A Shah; Nicole Howe; Martin Caffrey; Vadim Cherezov
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

10.  Nonlinear optical imaging for sensitive detection of crystals in bulk amorphous powders.

Authors:  Umesh S Kestur; Duangporn Wanapun; Scott J Toth; Lindsay A Wegiel; Garth J Simpson; Lynne S Taylor
Journal:  J Pharm Sci       Date:  2012-07-30       Impact factor: 3.534

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