Literature DB >> 19966806

B cell-specific and stimulation-responsive enhancers derepress Aicda by overcoming the effects of silencers.

Thinh Huy Tran1, Mikiyo Nakata, Keiichiro Suzuki, Nasim A Begum, Reiko Shinkura, Sidonia Fagarasan, Tasuku Honjo, Hitoshi Nagaoka.   

Abstract

Activation-induced cytidine deaminase (AID) is essential for the generation of antibody memory but also targets oncogenes, among other genes. We investigated the transcriptional regulation of Aicda (which encodes AID) in class switch-inducible CH12F3-2 cells and found that Aicda regulation involved derepression by several layers of positive regulatory elements in addition to the 5' promoter region. The 5' upstream region contained functional motifs for the response to signaling by cytokines, the ligand for the costimulatory molecule CD40 or stimuli that activated the transcription factor NF-kappaB. The first intron contained functional binding elements for the ubiquitous silencers c-Myb and E2f and for the B cell-specific activator Pax5 and E-box-binding proteins. Our results show that Aicda is regulated by the balance between B cell-specific and stimulation-responsive elements and ubiquitous silencers.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19966806     DOI: 10.1038/ni.1829

Source DB:  PubMed          Journal:  Nat Immunol        ISSN: 1529-2908            Impact factor:   25.606


  48 in total

1.  A composite C/EBP binding site is essential for the activity of the promoter of the IL-3/IL-5/granulocyte-macrophage colony-stimulating factor receptor beta c gene.

Authors:  T B van Dijk; B Baltus; J A Raaijmakers; J W Lammers; L Koenderman; R P de Groot
Journal:  J Immunol       Date:  1999-09-01       Impact factor: 5.422

2.  Specificity of nuclear protein binding to a CYP1A1 negative regulatory element.

Authors:  Scott R Nagy; Michael S Denison
Journal:  Biochem Biophys Res Commun       Date:  2002-08-30       Impact factor: 3.575

3.  Expression of activation-induced cytidine deaminase in human hepatocytes via NF-kappaB signaling.

Authors:  Y Endo; H Marusawa; K Kinoshita; T Morisawa; T Sakurai; I-M Okazaki; K Watashi; K Shimotohno; T Honjo; T Chiba
Journal:  Oncogene       Date:  2007-04-02       Impact factor: 9.867

4.  Specific expression of activation-induced cytidine deaminase (AID), a novel member of the RNA-editing deaminase family in germinal center B cells.

Authors:  M Muramatsu; V S Sankaranand; S Anant; M Sugai; K Kinoshita; N O Davidson; T Honjo
Journal:  J Biol Chem       Date:  1999-06-25       Impact factor: 5.157

5.  Induction of activation-induced cytidine deaminase gene expression by IL-4 and CD40 ligation is dependent on STAT6 and NFkappaB.

Authors:  Fatma Dedeoglu; Bruce Horwitz; Jayanta Chaudhuri; Frederick W Alt; Raif S Geha
Journal:  Int Immunol       Date:  2004-03       Impact factor: 4.823

6.  Organ-specific profiles of genetic changes in cancers caused by activation-induced cytidine deaminase expression.

Authors:  Toshiyuki Morisawa; Hiroyuki Marusawa; Yoshihide Ueda; Akio Iwai; Il-mi Okazaki; Tasuku Honjo; Tsutomu Chiba
Journal:  Int J Cancer       Date:  2008-12-15       Impact factor: 7.396

7.  Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2).

Authors:  P Revy; T Muto; Y Levy; F Geissmann; A Plebani; O Sanal; N Catalan; M Forveille; R Dufourcq-Labelouse; A Gennery; I Tezcan; F Ersoy; H Kayserili; A G Ugazio; N Brousse; M Muramatsu; L D Notarangelo; K Kinoshita; T Honjo; A Fischer; A Durandy
Journal:  Cell       Date:  2000-09-01       Impact factor: 41.582

8.  AID expression levels determine the extent of cMyc oncogenic translocations and the incidence of B cell tumor development.

Authors:  Makiko Takizawa; Helena Tolarová; Zhiyu Li; Wendy Dubois; Susan Lim; Elsa Callen; Sonia Franco; Maria Mosaico; Lionel Feigenbaum; Frederick W Alt; André Nussenzweig; Michael Potter; Rafael Casellas
Journal:  J Exp Med       Date:  2008-08-04       Impact factor: 14.307

9.  HoxC4 binds to the promoter of the cytidine deaminase AID gene to induce AID expression, class-switch DNA recombination and somatic hypermutation.

Authors:  Seok-Rae Park; Hong Zan; Zsuzsanna Pal; Jinsong Zhang; Ahmed Al-Qahtani; Egest J Pone; Zhenming Xu; Thach Mai; Paolo Casali
Journal:  Nat Immunol       Date:  2009-04-12       Impact factor: 25.606

10.  Activation-induced cytidine deaminase acts as a mutator in BCR-ABL1-transformed acute lymphoblastic leukemia cells.

Authors:  Niklas Feldhahn; Nadine Henke; Kai Melchior; Cihangir Duy; Bonaventure Ndikung Soh; Florian Klein; Gregor von Levetzow; Bernd Giebel; Aihong Li; Wolf-Karsten Hofmann; Hassan Jumaa; Markus Müschen
Journal:  J Exp Med       Date:  2007-05-07       Impact factor: 14.307

View more
  62 in total

Review 1.  Immunoglobulin class-switch DNA recombination: induction, targeting and beyond.

Authors:  Zhenming Xu; Hong Zan; Egest J Pone; Thach Mai; Paolo Casali
Journal:  Nat Rev Immunol       Date:  2012-06-25       Impact factor: 53.106

Review 2.  Combinatorial mechanisms regulating AID-dependent DNA deamination: interacting proteins and post-translational modifications.

Authors:  Bao Q Vuong; Jayanta Chaudhuri
Journal:  Semin Immunol       Date:  2012-07-06       Impact factor: 11.130

3.  Modular utilization of distal cis-regulatory elements controls Ifng gene expression in T cells activated by distinct stimuli.

Authors:  Anand Balasubramani; Yoichiro Shibata; Gregory E Crawford; Albert S Baldwin; Robin D Hatton; Casey T Weaver
Journal:  Immunity       Date:  2010-07-23       Impact factor: 31.745

Review 4.  Complex regulation and function of activation-induced cytidine deaminase.

Authors:  Janet Stavnezer
Journal:  Trends Immunol       Date:  2011-04-13       Impact factor: 16.687

Review 5.  Age effects on mouse and human B cells.

Authors:  Bonnie B Blomberg; Daniela Frasca
Journal:  Immunol Res       Date:  2013-12       Impact factor: 2.829

6.  Combinatorial H3K9acS10ph histone modification in IgH locus S regions targets 14-3-3 adaptors and AID to specify antibody class-switch DNA recombination.

Authors:  Guideng Li; Zhenming Xu; Clayton A White; Tonika Lam; Egest J Pone; Daniel C Tran; Ken L Hayama; Hong Zan; Paolo Casali
Journal:  Cell Rep       Date:  2013-10-24       Impact factor: 9.423

Review 7.  Walking the AID tightrope.

Authors:  Mieun Lee-Theilen; Jayanta Chaudhuri
Journal:  Nat Immunol       Date:  2010-02       Impact factor: 25.606

Review 8.  Activation-induced cytidine deaminase in antibody diversification and chromosome translocation.

Authors:  Anna Gazumyan; Anne Bothmer; Isaac A Klein; Michel C Nussenzweig; Kevin M McBride
Journal:  Adv Cancer Res       Date:  2012       Impact factor: 6.242

Review 9.  Regulation of immunoglobulin class-switch recombination: choreography of noncoding transcription, targeted DNA deamination, and long-range DNA repair.

Authors:  Allysia J Matthews; Simin Zheng; Lauren J DiMenna; Jayanta Chaudhuri
Journal:  Adv Immunol       Date:  2014       Impact factor: 3.543

Review 10.  AID targeting: old mysteries and new challenges.

Authors:  Vivek Chandra; Alexandra Bortnick; Cornelis Murre
Journal:  Trends Immunol       Date:  2015-08-04       Impact factor: 16.687

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.