Literature DB >> 22771392

Combinatorial mechanisms regulating AID-dependent DNA deamination: interacting proteins and post-translational modifications.

Bao Q Vuong1, Jayanta Chaudhuri.   

Abstract

Protective humoral immune responses result from immunoglobulin (Ig) diversification reactions that proceed through programmed DNA double-strand breaks and mutations in developing or mature B cells. While primary Ig diversity is dependent on V(D)J recombination and the RAG proteins, secondary diversification is achieved through class switch recombination (CSR) and somatic hypermutation (SHM), which require AID (activation induced deaminase). Because aberrant AID activity can result in mutations in non-Ig loci and DNA translocations between the Ig locus and non-Ig genes, the activity of AID must be stringently regulated. AID mRNA expression is regulated transcriptionally by cytokine stimulation and post-transcriptionally by miRNAs. AID activity is regulated by post-translational modifications, subcellular localization, and interaction with other proteins. All of these molecular mechanisms have evolved to specifically induce AID-dependent mutations and DNA double-strand breaks at the Ig loci to promote maximal Ig gene diversification while limiting the access of this mutator to non-Ig regions.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22771392      PMCID: PMC3471156          DOI: 10.1016/j.smim.2012.05.006

Source DB:  PubMed          Journal:  Semin Immunol        ISSN: 1044-5323            Impact factor:   11.130


  136 in total

1.  GANP-mediated recruitment of activation-induced cytidine deaminase to cell nuclei and to immunoglobulin variable region DNA.

Authors:  Kazuhiko Maeda; Shailendra Kumar Singh; Kazufumi Eda; Masahiro Kitabatake; Phuong Pham; Myron F Goodman; Nobuo Sakaguchi
Journal:  J Biol Chem       Date:  2010-05-27       Impact factor: 5.157

Review 2.  Walking the AID tightrope.

Authors:  Mieun Lee-Theilen; Jayanta Chaudhuri
Journal:  Nat Immunol       Date:  2010-02       Impact factor: 25.606

3.  Reprogramming towards pluripotency requires AID-dependent DNA demethylation.

Authors:  Nidhi Bhutani; Jennifer J Brady; Mara Damian; Alessandra Sacco; Stéphane Y Corbel; Helen M Blau
Journal:  Nature       Date:  2010-02-25       Impact factor: 49.962

4.  B cell-specific and stimulation-responsive enhancers derepress Aicda by overcoming the effects of silencers.

Authors:  Thinh Huy Tran; Mikiyo Nakata; Keiichiro Suzuki; Nasim A Begum; Reiko Shinkura; Sidonia Fagarasan; Tasuku Honjo; Hitoshi Nagaoka
Journal:  Nat Immunol       Date:  2009-12-06       Impact factor: 25.606

5.  Alternative end-joining catalyzes class switch recombination in the absence of both Ku70 and DNA ligase 4.

Authors:  Cristian Boboila; Catherine Yan; Duane R Wesemann; Mila Jankovic; Jing H Wang; John Manis; Andre Nussenzweig; Michel Nussenzweig; Frederick W Alt
Journal:  J Exp Med       Date:  2010-02-08       Impact factor: 14.307

6.  AID produces DNA double-strand breaks in non-Ig genes and mature B cell lymphomas with reciprocal chromosome translocations.

Authors:  Davide F Robbiani; Samuel Bunting; Niklas Feldhahn; Anne Bothmer; Jordi Camps; Stephanie Deroubaix; Kevin M McBride; Isaac A Klein; Gary Stone; Thomas R Eisenreich; Thomas Ried; André Nussenzweig; Michel C Nussenzweig
Journal:  Mol Cell       Date:  2009-11-25       Impact factor: 17.970

7.  Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

Authors:  Christian Popp; Wendy Dean; Suhua Feng; Shawn J Cokus; Simon Andrews; Matteo Pellegrini; Steven E Jacobsen; Wolf Reik
Journal:  Nature       Date:  2010-02-25       Impact factor: 49.962

8.  Progesterone inhibits activation-induced deaminase by binding to the promoter.

Authors:  Siim Pauklin; Svend K Petersen-Mahrt
Journal:  J Immunol       Date:  2009-06-24       Impact factor: 5.422

9.  Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway.

Authors:  Petra Hajkova; Sean J Jeffries; Caroline Lee; Nigel Miller; Stephen P Jackson; M Azim Surani
Journal:  Science       Date:  2010-07-02       Impact factor: 47.728

Review 10.  DNA deaminases: AIDing hormones in immunity and cancer.

Authors:  Svend K Petersen-Mahrt; Heather A Coker; Siim Pauklin
Journal:  J Mol Med (Berl)       Date:  2009-06-25       Impact factor: 4.599

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  17 in total

1.  TRAF3 Acts as a Checkpoint of B Cell Receptor Signaling to Control Antibody Class Switch Recombination and Anergy.

Authors:  Zhangguo Chen; Alexandra Krinsky; Rachel A Woolaver; Xiaoguang Wang; Samantha M Y Chen; Vince Popolizio; Ping Xie; Jing H Wang
Journal:  J Immunol       Date:  2020-06-26       Impact factor: 5.422

2.  Transcription factor YY1 can control AID-mediated mutagenesis in mice.

Authors:  Kristina Zaprazna; Arindam Basu; Nikola Tom; Vibha Jha; Suchita Hodawadekar; Lenka Radova; Jitka Malcikova; Boris Tichy; Sarka Pospisilova; Michael L Atchison
Journal:  Eur J Immunol       Date:  2017-11-14       Impact factor: 5.532

Review 3.  Regulation of AID, the B-cell genome mutator.

Authors:  Celia Keim; David Kazadi; Gerson Rothschild; Uttiya Basu
Journal:  Genes Dev       Date:  2013-01-01       Impact factor: 11.361

4.  Polyclonal hyper-IgE mouse model reveals mechanistic insights into antibody class switch recombination.

Authors:  Shahram Misaghi; Kate Senger; Tao Sai; Yan Qu; Yonglian Sun; Kajal Hamidzadeh; Allen Nguyen; Zhaoyu Jin; Meijuan Zhou; Donghong Yan; Wei Yu Lin; Zhonghua Lin; Maria N Lorenzo; Andrew Sebrell; Jiabing Ding; Min Xu; Patrick Caplazi; Cary D Austin; Mercedesz Balazs; Merone Roose-Girma; Laura DeForge; Søren Warming; Wyne P Lee; Vishva M Dixit; Ali A Zarrin
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

Review 5.  Regulation of immunoglobulin class-switch recombination: choreography of noncoding transcription, targeted DNA deamination, and long-range DNA repair.

Authors:  Allysia J Matthews; Simin Zheng; Lauren J DiMenna; Jayanta Chaudhuri
Journal:  Adv Immunol       Date:  2014       Impact factor: 3.543

6.  HSP90 inhibitors decrease AID levels and activity in mice and in human cells.

Authors:  Damien Montamat-Sicotte; Ludivine C Litzler; Cecilia Abreu; Shiva Safavi; Astrid Zahn; Alexandre Orthwein; Markus Müschen; Pablo Oppezzo; Denise P Muñoz; Javier M Di Noia
Journal:  Eur J Immunol       Date:  2015-05-18       Impact factor: 5.532

7.  A DNA break- and phosphorylation-dependent positive feedback loop promotes immunoglobulin class-switch recombination.

Authors:  Kayleigh Herrick-Reynolds; Bharat Vaidyanathan; Joseph N Pucella; Bao Q Vuong; Anna J Ucher; Nina M Donghia; Xiwen Gu; Laura Nicolas; Urszula Nowak; Numa Rahman; Matthew P Strout; Kevin D Mills; Janet Stavnezer; Jayanta Chaudhuri
Journal:  Nat Immunol       Date:  2013-10-06       Impact factor: 25.606

8.  Endonuclease and redox activities of human apurinic/apyrimidinic endonuclease 1 have distinctive and essential functions in IgA class switch recombination.

Authors:  Barbara Frossi; Giulia Antoniali; Kefei Yu; Nahid Akhtar; Mark H Kaplan; Mark R Kelley; Gianluca Tell; Carlo E M Pucillo
Journal:  J Biol Chem       Date:  2019-01-31       Impact factor: 5.157

Review 9.  AID targeting: old mysteries and new challenges.

Authors:  Vivek Chandra; Alexandra Bortnick; Cornelis Murre
Journal:  Trends Immunol       Date:  2015-08-04       Impact factor: 16.687

10.  Mouse endometrial stromal cells and progesterone inhibit the activation and regulate the differentiation and antibody secretion of mouse B cells.

Authors:  Li Zhang; Kai-Kai Chang; Ming-Qing Li; Da-Jin Li; Xiao-Ying Yao
Journal:  Int J Clin Exp Pathol       Date:  2013-12-15
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