Literature DB >> 22728528

Immunoglobulin class-switch DNA recombination: induction, targeting and beyond.

Zhenming Xu1, Hong Zan, Egest J Pone, Thach Mai, Paolo Casali.   

Abstract

Class-switch DNA recombination (CSR) of the immunoglobulin heavy chain (IGH) locus is central to the maturation of the antibody response and crucially requires the cytidine deaminase AID. CSR involves changes in the chromatin state and the transcriptional activation of the IGH locus at the upstream and downstream switch (S) regions that are to undergo S-S DNA recombination. In addition, CSR involves the induction of AID expression and the targeting of CSR factors to S regions by 14-3-3 adaptors, and it is facilitated by the transcription machinery and by histone modifications. In this Review, we focus on recent advances regarding the induction and targeting of CSR and outline an integrated model of the assembly of macromolecular complexes that transduce crucial epigenetic information to enzymatic effectors of the CSR machinery.

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Year:  2012        PMID: 22728528      PMCID: PMC3545482          DOI: 10.1038/nri3216

Source DB:  PubMed          Journal:  Nat Rev Immunol        ISSN: 1474-1733            Impact factor:   53.106


  142 in total

Review 1.  Toll-like receptors and B-cell receptors synergize to induce immunoglobulin class-switch DNA recombination: relevance to microbial antibody responses.

Authors:  Egest J Pone; Hong Zan; Jingsong Zhang; Ahmed Al-Qahtani; Zhenming Xu; Paolo Casali
Journal:  Crit Rev Immunol       Date:  2010       Impact factor: 2.214

2.  The RNF8/RNF168 ubiquitin ligase cascade facilitates class switch recombination.

Authors:  Shaliny Ramachandran; Richard Chahwan; Rajeev M Nepal; Darina Frieder; Stephanie Panier; Sergio Roa; Ahmad Zaheen; Daniel Durocher; Matthew D Scharff; Alberto Martin
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-22       Impact factor: 11.205

Review 3.  Adaptive immune regulation in the gut: T cell-dependent and T cell-independent IgA synthesis.

Authors:  Sidonia Fagarasan; Shimpei Kawamoto; Osami Kanagawa; Keiichiro Suzuki
Journal:  Annu Rev Immunol       Date:  2010       Impact factor: 28.527

4.  AID-induced decrease in topoisomerase 1 induces DNA structural alteration and DNA cleavage for class switch recombination.

Authors:  Maki Kobayashi; Masatoshi Aida; Hitoshi Nagaoka; Nasim A Begum; Yoko Kitawaki; Mikiyo Nakata; Andre Stanlie; Tomomitsu Doi; Lucia Kato; Il-mi Okazaki; Reiko Shinkura; Masamichi Muramatsu; Kazuo Kinoshita; Tasuku Honjo
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-11       Impact factor: 11.205

5.  B cell-specific and stimulation-responsive enhancers derepress Aicda by overcoming the effects of silencers.

Authors:  Thinh Huy Tran; Mikiyo Nakata; Keiichiro Suzuki; Nasim A Begum; Reiko Shinkura; Sidonia Fagarasan; Tasuku Honjo; Hitoshi Nagaoka
Journal:  Nat Immunol       Date:  2009-12-06       Impact factor: 25.606

6.  Batf coordinates multiple aspects of B and T cell function required for normal antibody responses.

Authors:  Briana C Betz; Kimberly L Jordan-Williams; Chuanwu Wang; Seung Goo Kang; Juan Liao; Michael R Logan; Chang H Kim; Elizabeth J Taparowsky
Journal:  J Exp Med       Date:  2010-04-26       Impact factor: 14.307

7.  Rnf8 deficiency impairs class switch recombination, spermatogenesis, and genomic integrity and predisposes for cancer.

Authors:  Li Li; Marie-Jo Halaby; Anne Hakem; Renato Cardoso; Samah El Ghamrasni; Shane Harding; Norman Chan; Robert Bristow; Otto Sanchez; Daniel Durocher; Razqallah Hakem
Journal:  J Exp Med       Date:  2010-04-12       Impact factor: 14.307

8.  Class switching and meiotic defects in mice lacking the E3 ubiquitin ligase RNF8.

Authors:  Margarida Almeida Santos; Michael S Y Huen; Mila Jankovic; Hua-Tang Chen; Andrés J López-Contreras; Isaac A Klein; Nancy Wong; Juan L R Barbancho; Oscar Fernandez-Capetillo; Michel C Nussenzweig; Junjie Chen; André Nussenzweig
Journal:  J Exp Med       Date:  2010-04-12       Impact factor: 14.307

9.  AID produces DNA double-strand breaks in non-Ig genes and mature B cell lymphomas with reciprocal chromosome translocations.

Authors:  Davide F Robbiani; Samuel Bunting; Niklas Feldhahn; Anne Bothmer; Jordi Camps; Stephanie Deroubaix; Kevin M McBride; Isaac A Klein; Gary Stone; Thomas R Eisenreich; Thomas Ried; André Nussenzweig; Michel C Nussenzweig
Journal:  Mol Cell       Date:  2009-11-25       Impact factor: 17.970

10.  Switch recombination and somatic hypermutation are controlled by the heavy chain 3' enhancer region.

Authors:  Wesley A Dunnick; John T Collins; Jian Shi; Gerwin Westfield; Clinton Fontaine; Paul Hakimpour; F Nina Papavasiliou
Journal:  J Exp Med       Date:  2009-11-02       Impact factor: 14.307

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  186 in total

1.  TRAF3 Acts as a Checkpoint of B Cell Receptor Signaling to Control Antibody Class Switch Recombination and Anergy.

Authors:  Zhangguo Chen; Alexandra Krinsky; Rachel A Woolaver; Xiaoguang Wang; Samantha M Y Chen; Vince Popolizio; Ping Xie; Jing H Wang
Journal:  J Immunol       Date:  2020-06-26       Impact factor: 5.422

2.  Histone deacetylase inhibitors upregulate B cell microRNAs that silence AID and Blimp-1 expression for epigenetic modulation of antibody and autoantibody responses.

Authors:  Clayton A White; Egest J Pone; Tonika Lam; Connie Tat; Ken L Hayama; Guideng Li; Hong Zan; Paolo Casali
Journal:  J Immunol       Date:  2014-11-12       Impact factor: 5.422

3.  Complexity of the human memory B-cell compartment is determined by the versatility of clonal diversification in germinal centers.

Authors:  Bettina Budeus; Stefanie Schweigle de Reynoso; Martina Przekopowitz; Daniel Hoffmann; Marc Seifert; Ralf Küppers
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

4.  Antibodies to Protein but Not Glycolipid Structures Are Important for Host Defense against Mycoplasma pneumoniae.

Authors:  Patrick M Meyer Sauteur; Adrianus C J M de Bruijn; Catarina Graça; Anne P Tio-Gillen; Silvia C Estevão; Theo Hoogenboezem; Rudi W Hendriks; Christoph Berger; Bart C Jacobs; Annemarie M C van Rossum; Ruth Huizinga; Wendy W J Unger
Journal:  Infect Immun       Date:  2019-01-24       Impact factor: 3.441

5.  You break it, you fix it: functions for AID downstream of deamination.

Authors:  Rebecca K Delker; F Nina Papavasiliou
Journal:  Nat Immunol       Date:  2013-11       Impact factor: 25.606

6.  Transcription factor YY1 can control AID-mediated mutagenesis in mice.

Authors:  Kristina Zaprazna; Arindam Basu; Nikola Tom; Vibha Jha; Suchita Hodawadekar; Lenka Radova; Jitka Malcikova; Boris Tichy; Sarka Pospisilova; Michael L Atchison
Journal:  Eur J Immunol       Date:  2017-11-14       Impact factor: 5.532

7.  The Energetics and Physiological Impact of Cohesin Extrusion.

Authors:  Laura Vian; Aleksandra Pękowska; Suhas S P Rao; Kyong-Rim Kieffer-Kwon; Seolkyoung Jung; Laura Baranello; Su-Chen Huang; Laila El Khattabi; Marei Dose; Nathanael Pruett; Adrian L Sanborn; Andres Canela; Yaakov Maman; Anna Oksanen; Wolfgang Resch; Xingwang Li; Byoungkoo Lee; Alexander L Kovalchuk; Zhonghui Tang; Steevenson Nelson; Michele Di Pierro; Ryan R Cheng; Ido Machol; Brian Glenn St Hilaire; Neva C Durand; Muhammad S Shamim; Elena K Stamenova; José N Onuchic; Yijun Ruan; Andre Nussenzweig; David Levens; Erez Lieberman Aiden; Rafael Casellas
Journal:  Cell       Date:  2018-04-26       Impact factor: 41.582

8.  Ezrin tunes the magnitude of humoral immunity.

Authors:  Debasis Pore; Neetha Parameswaran; Ken Matsui; Matthew B Stone; Ichiko Saotome; Andrea I McClatchey; Sarah L Veatch; Neetu Gupta
Journal:  J Immunol       Date:  2013-09-16       Impact factor: 5.422

9.  Naturally occurring mutation affecting the MyD88-binding site of TNFRSF13B impairs triggering of class switch recombination.

Authors:  Maria B Almejun; Montserrat Cols; Marta Zelazko; Matias Oleastro; Andrea Cerutti; Pablo Oppezzo; Charlotte Cunningham-Rundles; Silvia Danielian
Journal:  Eur J Immunol       Date:  2013-01-18       Impact factor: 5.532

10.  Genome-wide alterations of uracil distribution patterns in human DNA upon chemotherapeutic treatments.

Authors:  Hajnalka L Pálinkás; Angéla Békési; Gergely Róna; Lőrinc Pongor; Gábor Papp; Gergely Tihanyi; Eszter Holub; Ádám Póti; Carolina Gemma; Simak Ali; Michael J Morten; Eli Rothenberg; Michele Pagano; Dávid Szűts; Balázs Győrffy; Beáta G Vértessy
Journal:  Elife       Date:  2020-09-21       Impact factor: 8.140

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