Literature DB >> 22429855

Activation-induced cytidine deaminase in antibody diversification and chromosome translocation.

Anna Gazumyan1, Anne Bothmer, Isaac A Klein, Michel C Nussenzweig, Kevin M McBride.   

Abstract

DNA damage, rearrangement, and mutation of the human genome are the basis of carcinogenesis and thought to be avoided at all costs. An exception is the adaptive immune system where lymphocytes utilize programmed DNA damage to effect antigen receptor diversification. Both B and T lymphocytes diversify their antigen receptors through RAG1/2 mediated recombination, but B cells undergo two additional processes--somatic hypermutation (SHM) and class-switch recombination (CSR), both initiated by activation-induced cytidine deaminase (AID). AID deaminates cytidines in DNA resulting in U:G mismatches that are processed into point mutations in SHM or double-strand breaks in CSR. Although AID activity is focused at Immunoglobulin (Ig) gene loci, it also targets a wide array of non-Ig genes including oncogenes associated with lymphomas. Here, we review the molecular basis of AID regulation, targeting, and initiation of CSR and SHM, as well as AID's role in generating chromosome translocations that contribute to lymphomagenesis.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22429855      PMCID: PMC4353630          DOI: 10.1016/B978-0-12-394280-7.00005-1

Source DB:  PubMed          Journal:  Adv Cancer Res        ISSN: 0065-230X            Impact factor:   6.242


  119 in total

1.  Positive transcription elongation factor B phosphorylates hSPT5 and RNA polymerase II carboxyl-terminal domain independently of cyclin-dependent kinase-activating kinase.

Authors:  J B Kim; P A Sharp
Journal:  J Biol Chem       Date:  2001-01-05       Impact factor: 5.157

2.  Somatic hypermutation of immunoglobulin genes is linked to transcription initiation.

Authors:  A Peters; U Storb
Journal:  Immunity       Date:  1996-01       Impact factor: 31.745

3.  Role of genomic instability and p53 in AID-induced c-myc-Igh translocations.

Authors:  Almudena R Ramiro; Mila Jankovic; Elsa Callen; Simone Difilippantonio; Hua-Tang Chen; Kevin M McBride; Thomas R Eisenreich; Junjie Chen; Ross A Dickins; Scott W Lowe; Andre Nussenzweig; Michel C Nussenzweig
Journal:  Nature       Date:  2006-01-08       Impact factor: 49.962

4.  S region sequence, RNA polymerase II, and histone modifications create chromatin accessibility during class switch recombination.

Authors:  Lili Wang; Robert Wuerffel; Scott Feldman; Ahmed Amine Khamlichi; Amy L Kenter
Journal:  J Exp Med       Date:  2009-07-13       Impact factor: 14.307

5.  Two levels of protection for the B cell genome during somatic hypermutation.

Authors:  Man Liu; Jamie L Duke; Daniel J Richter; Carola G Vinuesa; Christopher C Goodnow; Steven H Kleinstein; David G Schatz
Journal:  Nature       Date:  2008-02-14       Impact factor: 49.962

Review 6.  A coming-of-age story: activation-induced cytidine deaminase turns 10.

Authors:  Rebecca K Delker; Sebastian D Fugmann; F Nina Papavasiliou
Journal:  Nat Immunol       Date:  2009-10-20       Impact factor: 25.606

7.  Transcription-targeted DNA deamination by the AID antibody diversification enzyme.

Authors:  Jayanta Chaudhuri; Ming Tian; Chan Khuong; Katrin Chua; Eric Pinaud; Frederick W Alt
Journal:  Nature       Date:  2003-04-09       Impact factor: 49.962

8.  Impact of phosphorylation and phosphorylation-null mutants on the activity and deamination specificity of activation-induced cytidine deaminase.

Authors:  Phuong Pham; Marcus B Smolka; Peter Calabrese; Alice Landolph; Ke Zhang; Huilin Zhou; Myron F Goodman
Journal:  J Biol Chem       Date:  2008-04-16       Impact factor: 5.157

9.  Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2).

Authors:  P Revy; T Muto; Y Levy; F Geissmann; A Plebani; O Sanal; N Catalan; M Forveille; R Dufourcq-Labelouse; A Gennery; I Tezcan; F Ersoy; H Kayserili; A G Ugazio; N Brousse; M Muramatsu; L D Notarangelo; K Kinoshita; T Honjo; A Fischer; A Durandy
Journal:  Cell       Date:  2000-09-01       Impact factor: 41.582

Review 10.  Molecular mechanisms of antibody somatic hypermutation.

Authors:  Javier M Di Noia; Michael S Neuberger
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

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  17 in total

1.  Biochemical Regulatory Features of Activation-Induced Cytidine Deaminase Remain Conserved from Lampreys to Humans.

Authors:  Emma M Quinlan; Justin J King; Chris T Amemiya; Ellen Hsu; Mani Larijani
Journal:  Mol Cell Biol       Date:  2017-09-26       Impact factor: 4.272

Review 2.  RNA Exosome Regulates AID DNA Mutator Activity in the B Cell Genome.

Authors:  Evangelos Pefanis; Uttiya Basu
Journal:  Adv Immunol       Date:  2015-05-14       Impact factor: 3.543

Review 3.  Functions and Malfunctions of Mammalian DNA-Cytosine Deaminases.

Authors:  Sachini U Siriwardena; Kang Chen; Ashok S Bhagwat
Journal:  Chem Rev       Date:  2016-09-01       Impact factor: 60.622

4.  Genome-wide mapping of regions preferentially targeted by the human DNA-cytosine deaminase APOBEC3A using uracil-DNA pulldown and sequencing.

Authors:  Ramin Sakhtemani; Vimukthi Senevirathne; Jessica Stewart; Madusha L W Perera; Roger Pique-Regi; Michael S Lawrence; Ashok S Bhagwat
Journal:  J Biol Chem       Date:  2019-08-19       Impact factor: 5.157

Review 5.  The origin of recurrent translocations in recombining lymphocytes: a balance between break frequency and nuclear proximity.

Authors:  Pedro P Rocha; Jane A Skok
Journal:  Curr Opin Cell Biol       Date:  2013-03-13       Impact factor: 8.382

Review 6.  Generation and repair of AID-initiated DNA lesions in B lymphocytes.

Authors:  Zhangguo Chen; Jing H Wang
Journal:  Front Med       Date:  2014-04-21       Impact factor: 4.592

Review 7.  Mechanisms and impacts of chromosomal translocations in cancers.

Authors:  Jing H Wang
Journal:  Front Med       Date:  2012-08-04       Impact factor: 4.592

8.  Cell Cycle Regulates Nuclear Stability of AID and Determines the Cellular Response to AID.

Authors:  Quy Le; Nancy Maizels
Journal:  PLoS Genet       Date:  2015-09-10       Impact factor: 5.917

9.  DNA deaminases induce break-associated mutation showers with implication of APOBEC3B and 3A in breast cancer kataegis.

Authors:  Benjamin Jm Taylor; Serena Nik-Zainal; Yee Ling Wu; Lucy A Stebbings; Keiran Raine; Peter J Campbell; Cristina Rada; Michael R Stratton; Michael S Neuberger
Journal:  Elife       Date:  2013-04-16       Impact factor: 8.140

10.  A comprehensive analysis of the effects of the deaminase AID on the transcriptome and methylome of activated B cells.

Authors:  Eric L Fritz; Brad R Rosenberg; Kenneth Lay; Aleksandra Mihailović; Thomas Tuschl; F Nina Papavasiliou
Journal:  Nat Immunol       Date:  2013-05-26       Impact factor: 25.606

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