Literature DB >> 23417323

Peptide-binding motifs associated with MHC molecules common in Chinese rhesus macaques are analogous to those of human HLA supertypes and include HLA-B27-like alleles.

Bianca R Mothé1, Scott Southwood, John Sidney, A Michelle English, Amanda Wriston, Ilka Hoof, Jeffrey Shabanowitz, Donald F Hunt, Alessandro Sette.   

Abstract

Chinese rhesus macaques are of particular interest in simian immunodeficiency virus/human immunodeficiency virus (SIV/HIV) research as these animals have prolonged kinetics of disease progression to acquired immunodeficiency syndrome (AIDS), compared to their Indian counterparts, suggesting that they may be a better model for HIV. Nevertheless, the specific mechanism(s) accounting for these kinetics remains unclear. The study of major histocompatibility complex (MHC) molecules, including their MHC/peptide-binding motifs, provides valuable information for measuring cellular immune responses and deciphering outcomes of infection and vaccine efficacy. In this study, we have provided detailed characterization of six prevalent Chinese rhesus macaque MHC class I alleles, yielding a combined phenotypic frequency of 29 %. The peptide-binding specificity of two of these alleles, Mamu-A2*01:02 and Mamu-B*010:01, as well as the previously characterized allele Mamu-B*003:01 (and Indian rhesus Mamu-B*003:01), was found to be analogous to that of alleles in the HLA-B27 supertype family. Specific alleles in the HLA-B27 supertype family, including HLA-B*27:05, have been associated with long-term nonprogression to AIDS in humans. All six alleles characterized in the present study were found to have specificities analogous to HLA supertype alleles. These data contribute to the concept that Chinese rhesus macaque MHC immunogenetics is more similar to HLA than their Indian rhesus macaque counterparts and thereby warrants further studies to decipher the role of these alleles in the context of SIV infection.

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Year:  2013        PMID: 23417323      PMCID: PMC3633659          DOI: 10.1007/s00251-013-0686-9

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  76 in total

1.  Simultaneous prediction of binding capacity for multiple molecules of the HLA B44 supertype.

Authors:  John Sidney; Scott Southwood; Valerie Pasquetto; Alessandro Sette
Journal:  J Immunol       Date:  2003-12-01       Impact factor: 5.422

2.  Open mass spectrometry search algorithm.

Authors:  Lewis Y Geer; Sanford P Markey; Jeffrey A Kowalak; Lukas Wagner; Ming Xu; Dawn M Maynard; Xiaoyu Yang; Wenyao Shi; Stephen H Bryant
Journal:  J Proteome Res       Date:  2004 Sep-Oct       Impact factor: 4.466

3.  Dominance of CD8 responses specific for epitopes bound by a single major histocompatibility complex class I molecule during the acute phase of viral infection.

Authors:  Bianca R Mothé; Helen Horton; Donald K Carter; Todd M Allen; Max E Liebl; Pam Skinner; Thorsten U Vogel; Sarah Fuenger; Kathy Vielhuber; William Rehrauer; Nancy Wilson; Genoveffa Franchini; John D Altman; Ashley Haase; Louis J Picker; David B Allison; David I Watkins
Journal:  J Virol       Date:  2002-01       Impact factor: 5.103

4.  Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs).

Authors:  S Kanthaswamy; J P Capitanio; C J Dubay; B Ferguson; T Folks; J C Ha; C E Hotchkiss; Z P Johnson; M G Katze; L S Kean; H Michael Kubisch; S Lank; L A Lyons; G M Miller; J Nylander; D H O'Connor; R E Palermo; D G Smith; E J Vallender; R W Wiseman; J Rogers
Journal:  J Med Primatol       Date:  2009-10       Impact factor: 0.667

5.  Two distinct HLA-A*0101-specific submotifs illustrate alternative peptide binding modes.

Authors:  A Kondo; J Sidney; S Southwood; M F del Guercio; E Appella; H Sakamoto; H M Grey; E Celis; R W Chesnut; R T Kubo; A Sette
Journal:  Immunogenetics       Date:  1997       Impact factor: 2.846

6.  SIV-infected Chinese-origin rhesus macaques express specific MHC class I alleles in either elite controllers or normal progressors.

Authors:  Daniel Wambua; Ryan Henderson; Christopher Solomon; Meredith Hunter; Preston Marx; Alessandro Sette; Bianca R Mothé
Journal:  J Med Primatol       Date:  2011-08       Impact factor: 0.667

7.  Functional classification of class II human leukocyte antigen (HLA) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes.

Authors:  Jason Greenbaum; John Sidney; Jolan Chung; Christian Brander; Bjoern Peters; Alessandro Sette
Journal:  Immunogenetics       Date:  2011-02-09       Impact factor: 2.846

8.  Peptide binding to the most frequent HLA-A class I alleles measured by quantitative molecular binding assays.

Authors:  A Sette; J Sidney; M F del Guercio; S Southwood; J Ruppert; C Dahlberg; H M Grey; R T Kubo
Journal:  Mol Immunol       Date:  1994-08       Impact factor: 4.407

9.  Cytotoxic T lymphocytes do not appear to select for mutations in an immunodominant epitope of simian immunodeficiency virus gag.

Authors:  Z W Chen; L Shen; M D Miller; S H Ghim; A L Hughes; N L Letvin
Journal:  J Immunol       Date:  1992-12-15       Impact factor: 5.422

10.  TCR clonotypes modulate the protective effect of HLA class I molecules in HIV-1 infection.

Authors:  Huabiao Chen; Zaza M Ndhlovu; Dongfang Liu; Lindsay C Porter; Justin W Fang; Sam Darko; Mark A Brockman; Toshiyuki Miura; Zabrina L Brumme; Arne Schneidewind; Alicja Piechocka-Trocha; Kevin T Cesa; Jennifer Sela; Thai D Cung; Ildiko Toth; Florencia Pereyra; Xu G Yu; Daniel C Douek; Daniel E Kaufmann; Todd M Allen; Bruce D Walker
Journal:  Nat Immunol       Date:  2012-06-10       Impact factor: 25.606

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  13 in total

1.  Unique peptide-binding motif for Mamu-B*037:01: an MHC class I allele common to Indian and Chinese rhesus macaques.

Authors:  Natasja G de Groot; Corrine M C Heijmans; Arnoud H de Ru; Chopie Hassan; Nel Otting; Gaby G M Doxiadis; Frits Koning; Peter A van Veelen; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2013-09-17       Impact factor: 2.846

2.  A population response analysis approach to assign class II HLA-epitope restrictions.

Authors:  Sinu Paul; Myles B C Dillon; Cecilia S Lindestam Arlehamn; Huang Huang; Mark M Davis; Denise M McKinney; Thomas Jens Scriba; John Sidney; Bjoern Peters; Alessandro Sette
Journal:  J Immunol       Date:  2015-05-06       Impact factor: 5.422

3.  Intragastric Administration of Lactobacillus plantarum and 2,2'-Dithiodipyridine-Inactivated Simian Immunodeficiency Virus (SIV) Does Not Protect Indian Rhesus Macaques from Intrarectal SIV Challenge or Reduce Virus Replication after Transmission.

Authors:  Diane G Carnathan; Joseph J Mackel; Shelby L Sweat; Chiamaka A Enemuo; Etse H Gebru; Pallavi Dhadvai; Sailaja Gangadhara; Sakeenah Hicks; Thomas H Vanderford; Rama R Amara; José Esparza; Wei Lu; Jean-Marie Andrieu; Guido Silvestri
Journal:  J Virol       Date:  2018-04-27       Impact factor: 5.103

Review 4.  Immunopathogenesis of simian immunodeficiency virus infection in nonhuman primates.

Authors:  Joern E Schmitz; Birgit Korioth-Schmitz
Journal:  Curr Opin HIV AIDS       Date:  2013-07       Impact factor: 4.283

5.  HLA class I alleles are associated with peptide-binding repertoires of different size, affinity, and immunogenicity.

Authors:  Sinu Paul; Daniela Weiskopf; Michael A Angelo; John Sidney; Bjoern Peters; Alessandro Sette
Journal:  J Immunol       Date:  2013-11-04       Impact factor: 5.422

6.  The TB-specific CD4(+) T cell immune repertoire in both cynomolgus and rhesus macaques largely overlap with humans.

Authors:  Bianca R Mothé; Cecilia S Lindestam Arlehamn; Courtney Dow; Myles B C Dillon; Roger W Wiseman; Patrick Bohn; Julie Karl; Nadia A Golden; Trey Gilpin; Taylor W Foreman; Mark A Rodgers; Smriti Mehra; Thomas J Scriba; JoAnne L Flynn; Deepak Kaushal; David H O'Connor; Alessandro Sette
Journal:  Tuberculosis (Edinb)       Date:  2015-08-28       Impact factor: 3.131

Review 7.  Co-evolution of the MHC class I and KIR gene families in rhesus macaques: ancestry and plasticity.

Authors:  Natasja G de Groot; Jeroen H Blokhuis; Nel Otting; Gaby G M Doxiadis; Ronald E Bontrop
Journal:  Immunol Rev       Date:  2015-09       Impact factor: 12.988

8.  Primate immune responses to HIV-1 Env formulated in the saponin-based adjuvant AbISCO-100 in the presence or absence of TLR9 co-stimulation.

Authors:  Paola Martinez; Christopher Sundling; Sijy O'Dell; John R Mascola; Richard T Wyatt; Gunilla B Karlsson Hedestam
Journal:  Sci Rep       Date:  2015-03-12       Impact factor: 4.379

9.  Aikeqing decreases viral loads in SHIV89.6-infected Chinese rhesus macaques.

Authors:  Gao-Hong Zhang; Jian-Bao Han; Lin Zhu; Rong-Hua Luo; Xi-He Zhang; Xin Chen; Ying-Jie Hu; Lin-Chun Fu; Yong-Tang Zheng
Journal:  Chin Med       Date:  2016-07-01       Impact factor: 5.455

Review 10.  A 30-year journey of trial and error towards a tolerogenic AIDS vaccine.

Authors:  Jean-Marie Andrieu; Wei Lu
Journal:  Arch Virol       Date:  2018-07-24       Impact factor: 2.574

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