Literature DB >> 19820264

Spectrally resolved bioluminescence tomography with the third-order simplified spherical harmonics approximation.

Yujie Lu1, Ali Douraghy, Hidevaldo B Machado, David Stout, Jie Tian, Harvey Herschman, Arion F Chatziioannou.   

Abstract

Bioluminescence imaging has been extensively applied to in vivo small animal imaging. Quantitative three-dimensional bioluminescent source information obtained by using bioluminescence tomography can directly and much more accurately reflect biological changes as opposed to planar bioluminescence imaging. Preliminary simulated and experimental reconstruction results demonstrate the feasibility and promise of bioluminescence tomography. However, the use of multiple approximations, particularly the diffusion approximation theory, affects the quality of in vivo small animal-based image reconstructions. In the development of new reconstruction algorithms, high-order approximation models of the radiative transfer equation and spectrally resolved data introduce new challenges to the reconstruction algorithm and speed. In this paper, an SP(3)-based (the third-order simplified spherical harmonics approximation) spectrally resolved reconstruction algorithm is proposed. The simple linear relationship between the unknown source distribution and the spectrally resolved data is established in this algorithm. A parallel version of this algorithm is realized, making BLT reconstruction feasible for the whole body of small animals especially for fine spatial domain discretization. In simulation validations, the proposed algorithm shows improved reconstruction quality compared with diffusion approximation-based methods when high absorption, superficial sources and detection modes are considered. In addition, comparisons between fine and coarse mesh-based BLT reconstructions show the effects of numerical errors in reconstruction image quality. Finally, BLT reconstructions using in vivo mouse experiments further demonstrate the potential and effectiveness of the SP(3)-based reconstruction algorithm.

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Year:  2009        PMID: 19820264      PMCID: PMC2791679          DOI: 10.1088/0031-9155/54/21/003

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  22 in total

1.  A mouse optical simulation environment (MOSE) to investigate bioluminescent phenomena in the living mouse with the Monte Carlo method.

Authors:  Hui Li; Jie Tian; Fuping Zhu; Wenxiang Cong; Lihong V Wang; Eric A Hoffman; Ge Wang
Journal:  Acad Radiol       Date:  2004-09       Impact factor: 3.173

2.  FPGA Electronics for OPET: A Dual-Modality Optical and Positron Emission Tomograph.

Authors:  Ali Douraghy; Fernando R Rannou; Robert W Silverman; Arion F Chatziioannou
Journal:  IEEE Trans Nucl Sci       Date:  2008-10-01       Impact factor: 1.679

Review 3.  Looking and listening to light: the evolution of whole-body photonic imaging.

Authors:  Vasilis Ntziachristos; Jorge Ripoll; Lihong V Wang; Ralph Weissleder
Journal:  Nat Biotechnol       Date:  2005-03       Impact factor: 54.908

4.  Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo.

Authors:  Hui Zhao; Timothy C Doyle; Olivier Coquoz; Flora Kalish; Bradley W Rice; Christopher H Contag
Journal:  J Biomed Opt       Date:  2005 Jul-Aug       Impact factor: 3.170

5.  Effect of optical property estimation accuracy on tomographic bioluminescence imaging: simulation of a combined optical-PET (OPET) system.

Authors:  George Alexandrakis; Fernando R Rannou; Arion F Chatziioannou
Journal:  Phys Med Biol       Date:  2006-04-03       Impact factor: 3.609

6.  Spectrally resolved bioluminescence optical tomography.

Authors:  Hamid Dehghani; Scott C Davis; Shudong Jiang; Brian W Pogue; Keith D Paulsen; Michael S Patterson
Journal:  Opt Lett       Date:  2006-02-01       Impact factor: 3.776

7.  In vivo mouse studies with bioluminescence tomography.

Authors:  Ge Wang; Wenxiang Cong; Kumar Durairaj; Xin Qian; Haiou Shen; Patrick Sinn; Eric Hoffman; Geoffrey McLennan; Michael Henry
Journal:  Opt Express       Date:  2006-08-21       Impact factor: 3.894

8.  A Parallel Adaptive Finite Element Method for the Simulation of Photon Migration with the Radiative-Transfer-Based Model.

Authors:  Yujie Lu; Arion F Chatziioannou
Journal:  Commun Numer Methods Eng       Date:  2009

9.  Red-shifted Renilla reniformis luciferase variants for imaging in living subjects.

Authors:  Andreas Markus Loening; Anna M Wu; Sanjiv Sam Gambhir
Journal:  Nat Methods       Date:  2007-07-08       Impact factor: 28.547

10.  Multispectral bioluminescence tomography: methodology and simulation.

Authors:  Alexander X Cong; Ge Wang
Journal:  Int J Biomed Imaging       Date:  2006-02-05
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  10 in total

1.  The forward and inverse problem in tissue optics based on the radiative transfer equation: a brief review.

Authors:  Alexander D Klose
Journal:  J Quant Spectrosc Radiat Transf       Date:  2010-07-01       Impact factor: 2.468

2.  Regimen-specific effects of RNA-modified chimeric antigen receptor T cells in mice with advanced leukemia.

Authors:  David M Barrett; Xiaojun Liu; Shuguang Jiang; Carl H June; Stephan A Grupp; Yangbing Zhao
Journal:  Hum Gene Ther       Date:  2013-08       Impact factor: 5.695

3.  Light transport in turbid media with non-scattering, low-scattering and high absorption heterogeneities based on hybrid simplified spherical harmonics with radiosity model.

Authors:  Defu Yang; Xueli Chen; Zhen Peng; Xiaorui Wang; Jorge Ripoll; Jing Wang; Jimin Liang
Journal:  Biomed Opt Express       Date:  2013-09-23       Impact factor: 3.732

4.  In vivo bioluminescence tomography with a blocking-off finite-difference SP3 method and MRI/CT coregistration.

Authors:  Alexander D Klose; Bradley J Beattie; Hamid Dehghani; Lena Vider; Carl Le; Vladimir Ponomarev; Ronald Blasberg
Journal:  Med Phys       Date:  2010-01       Impact factor: 4.071

5.  Performance investigation of SP3 and diffusion approximation for three-dimensional whole-body optical imaging of small animals.

Authors:  Defu Yang; Xueli Chen; Xu Cao; Jing Wang; Jimin Liang; Jie Tian
Journal:  Med Biol Eng Comput       Date:  2015-04-08       Impact factor: 2.602

6.  A parallel adaptive finite element simplified spherical harmonics approximation solver for frequency domain fluorescence molecular imaging.

Authors:  Yujie Lu; Banghe Zhu; Haiou Shen; John C Rasmussen; Ge Wang; Eva M Sevick-Muraca
Journal:  Phys Med Biol       Date:  2010-07-30       Impact factor: 3.609

7.  Noninvasive bioluminescent imaging of primary patient acute lymphoblastic leukemia: a strategy for preclinical modeling.

Authors:  David M Barrett; Alix E Seif; Carmine Carpenito; David T Teachey; Jonathan D Fish; Carl H June; Stephan A Grupp; Gregor S D Reid
Journal:  Blood       Date:  2011-08-19       Impact factor: 22.113

8.  In vivo mouse bioluminescence tomography with radionuclide-based imaging validation.

Authors:  Yujie Lu; Hidevaldo B Machado; Qinan Bao; David Stout; Harvey Herschman; Arion F Chatziioannou
Journal:  Mol Imaging Biol       Date:  2011-02       Impact factor: 3.488

9.  Excitation-resolved fluorescence tomography with simplified spherical harmonics equations.

Authors:  Alexander D Klose; Thomas Pöschinger
Journal:  Phys Med Biol       Date:  2011-02-15       Impact factor: 3.609

10.  Improved reconstruction quality of bioluminescent images by combining SP(3) equations and Bregman iteration method.

Authors:  Qiang Wu; Jinchao Feng; Kebin Jia; Xiangyu Wang
Journal:  Comput Math Methods Med       Date:  2013-01-22       Impact factor: 2.238

  10 in total

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