Literature DB >> 19815364

A rapid, simple, and sensitive loop-mediated isothermal amplification method to detect toxigenic Vibrio cholerae in rectal swab samples.

Kazuhisa Okada1, Siriporn Chantaroj, Tooru Taniguchi, Yasuhiko Suzuki, Amonrattana Roobthaisong, Orapim Puiprom, Takeshi Honda, Pathom Sawanpanyalert.   

Abstract

Loop-mediated isothermal amplification (LAMP) method was designed for clinical diagnosis of Vibrio cholerae carrying the ctxA gene. The detection limits of the method were 5 fg of purified genomic DNA/reaction and 0.54 CFU/reaction. The method was applied to rectal swab samples from cholera patients and healthy volunteers (19 subjects each) and yielded the same results as the "gold standard" culture method, while the polymerase chain reaction-based method failed to detect V. cholerae in 8 of the positive samples. Direct application of this LAMP method without precultivation enabled the rapid detection of 5 asymptomatic carriers from rectal swabs of 21 household contacts of cholera patients. This LAMP method could be a sensitive, specific, inexpensive, and rapid detection tool for V. cholerae carrying the ctxA gene in the clinical laboratory and in the field. 2010 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19815364     DOI: 10.1016/j.diagmicrobio.2009.09.004

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN: 0732-8893            Impact factor:   2.803


  16 in total

1.  Evaluation of anatomically designed flocked rectal swabs for molecular detection of enteric pathogens in children admitted to hospital with severe gastroenteritis in Botswana.

Authors:  David M Goldfarb; Andrew P Steenhoff; Jeffrey M Pernica; Sylvia Chong; Kathy Luinstra; Margaret Mokomane; Loeto Mazhani; Isaac Quaye; Irene Goercke; James Mahony; Marek Smieja
Journal:  J Clin Microbiol       Date:  2014-08-27       Impact factor: 5.948

2.  Evaluation of Anatomically Designed Flocked Rectal Swabs for Use with the BioFire FilmArray Gastrointestinal Panel for Detection of Enteric Pathogens in Children Admitted to Hospital with Severe Gastroenteritis.

Authors:  Celia R Walker; Kwana Lechiile; Margaret Mokomane; Andrew P Steenhoff; Tonya Arscott-Mills; Jeffrey M Pernica; David M Goldfarb
Journal:  J Clin Microbiol       Date:  2019-11-22       Impact factor: 5.948

3.  Rapid, simple, and sensitive detection of Anaplasma phagocytophilum by loop-mediated isothermal amplification of the msp2 gene.

Authors:  Lei Pan; Lijuan Zhang; Guiqiang Wang; Qinghui Liu; Yanyan Yu; Shiwen Wang; Huilan Yu; Jing He
Journal:  J Clin Microbiol       Date:  2011-10-05       Impact factor: 5.948

4.  Type III effector VopC mediates invasion for Vibrio species.

Authors:  Lingling Zhang; Anne Marie Krachler; Christopher A Broberg; Yan Li; Hamid Mirzaei; Christopher J Gilpin; Kim Orth
Journal:  Cell Rep       Date:  2012-05-03       Impact factor: 9.423

Review 5.  The global problem of childhood diarrhoeal diseases: emerging strategies in prevention and management.

Authors:  Margaret Mokomane; Ishmael Kasvosve; Emilia de Melo; Jeffrey M Pernica; David M Goldfarb
Journal:  Ther Adv Infect Dis       Date:  2017-12-07

6.  Rapid, simple, and sensitive detection of the ompB gene of spotted fever group rickettsiae by loop-mediated isothermal amplification.

Authors:  Lei Pan; Lijuan Zhang; Guiqiang Wang; Qinghui Liu
Journal:  BMC Infect Dis       Date:  2012-10-11       Impact factor: 3.090

7.  Genotypic and PFGE/MLVA analyses of Vibrio cholerae O1: geographical spread and temporal changes during the 2007-2010 cholera outbreaks in Thailand.

Authors:  Kazuhisa Okada; Amonrattana Roobthaisong; Ichiro Nakagawa; Shigeyuki Hamada; Siriporn Chantaroj
Journal:  PLoS One       Date:  2012-01-24       Impact factor: 3.240

8.  A smartphone-based particle diffusometry platform for sub-attomolar detection of Vibrio cholerae in environmental water.

Authors:  Taylor J Moehling; Dong Hoon Lee; Meghan E Henderson; Mariah K McDonald; Preston H Tsang; Seba Kaakeh; Eugene S Kim; Steven T Wereley; Tamara L Kinzer-Ursem; Katherine N Clayton; Jacqueline C Linnes
Journal:  Biosens Bioelectron       Date:  2020-08-08       Impact factor: 10.618

9.  Rapid and sensitive detection of Plesiomonas shigelloides by loop-mediated isothermal amplification of the hugA gene.

Authors:  Shuang Meng; Jianguo Xu; Yanwen Xiong; Changyun Ye
Journal:  PLoS One       Date:  2012-10-15       Impact factor: 3.240

10.  Clinical Specimen-Direct LAMP: A Useful Tool for the Surveillance of blaOXA-23-Positive Carbapenem-Resistant Acinetobacter baumannii.

Authors:  Norihisa Yamamoto; Shigeto Hamaguchi; Yukihiro Akeda; Pitak Santanirand; Anusak Kerdsin; Masafumi Seki; Yoshikazu Ishii; Wantana Paveenkittiporn; Robert A Bonomo; Kazunori Oishi; Kumthorn Malathum; Kazunori Tomono
Journal:  PLoS One       Date:  2015-07-28       Impact factor: 3.240

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