Literature DB >> 32836088

A smartphone-based particle diffusometry platform for sub-attomolar detection of Vibrio cholerae in environmental water.

Taylor J Moehling1, Dong Hoon Lee2, Meghan E Henderson1, Mariah K McDonald1, Preston H Tsang1, Seba Kaakeh3, Eugene S Kim1, Steven T Wereley2, Tamara L Kinzer-Ursem1, Katherine N Clayton4, Jacqueline C Linnes5.   

Abstract

Each year, 3.4 million people die from waterborne diseases worldwide. Development of a rapid and portable platform for detecting and monitoring waterborne pathogens would significantly aid in reducing the incidence and spread of infectious diseases. By combining optical methods and smartphone technology with molecular assays, the sensitivity required to detect exceedingly low concentrations of waterborne pathogens can readily be achieved. Here, we implement smartphone-based particle diffusometry (PD) detection of loop-mediated isothermal amplification (LAMP) targeting the waterborne pathogen Vibrio cholerae (V. cholerae). By measuring the diffusion of 400 nm streptavidin-coated fluorescent nanoparticles imaged at 68X magnification on a smartphone, we can detect as few as 6 V. cholerae cells per reaction (0.66 aM) in just 35 minutes. In a double-blinded study with 132 pond water samples, we establish a 91.8% sensitivity, 95.2% specificity, and 94.3% accuracy of the smartphone-based PD platform for detection of V. cholerae. Together, these results demonstrate the utility of this smartphone-based PD platform for rapid and sensitive detection of V. cholerae at the point of use.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Biosensor; Loop-mediated isothermal amplification; Particle diffusometry; Point of use; Smartphone; Vibrio cholerae

Mesh:

Substances:

Year:  2020        PMID: 32836088      PMCID: PMC7532658          DOI: 10.1016/j.bios.2020.112497

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  40 in total

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Authors:  R J Adrian; C S Yao
Journal:  Appl Opt       Date:  1985-01-01       Impact factor: 1.980

2.  Physical characterization of nanoparticle size and surface modification using particle scattering diffusometry.

Authors:  Katherine N Clayton; Janelle W Salameh; Steven T Wereley; Tamara L Kinzer-Ursem
Journal:  Biomicrofluidics       Date:  2016-09-21       Impact factor: 2.800

3.  DNA Microviscosity Characterization with Particle Diffusometry for Downstream DNA Detection Applications.

Authors:  Katherine N Clayton; Gregory D Berglund; Jacqueline C Linnes; Tamara L Kinzer-Ursem; Steven T Wereley
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4.  Evaluation of a rapid dipstick (Crystal VC) for the diagnosis of cholera in Zanzibar and a comparison with previous studies.

Authors:  Benedikt Ley; Ahmed M Khatib; Kamala Thriemer; Lorenz von Seidlein; Jacqueline Deen; Asish Mukhopadyay; Na-Yoon Chang; Ramadhan Hashim; Wolfgang Schmied; Clara J-L Busch; Rita Reyburn; Thomas Wierzba; John D Clemens; Harald Wilfing; Godwin Enwere; Theresa Aguado; Mohammad S Jiddawi; David Sack; Said M Ali
Journal:  PLoS One       Date:  2012-05-25       Impact factor: 3.240

5.  Increased isolation frequency of toxigenic Vibrio cholerae O1 from environmental monitoring sites in Haiti.

Authors:  Meer T Alam; Thomas A Weppelmann; Ira Longini; Valery Madsen Beau De Rochars; John Glenn Morris; Afsar Ali
Journal:  PLoS One       Date:  2015-04-08       Impact factor: 3.240

Review 6.  Isothermal amplification methods for the detection of nucleic acids in microfluidic devices.

Authors:  Laura Maria Zanoli; Giuseppe Spoto
Journal:  Biosensors (Basel)       Date:  2012-12-27

7.  Strand Displacement Probes Combined with Isothermal Nucleic Acid Amplification for Instrument-Free Detection from Complex Samples.

Authors:  Elizabeth A Phillips; Taylor J Moehling; Sanchita Bhadra; Andrew D Ellington; Jacqueline C Linnes
Journal:  Anal Chem       Date:  2018-05-08       Impact factor: 6.986

8.  Smartphone-Imaged HIV-1 Reverse-Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) on a Chip from Whole Blood.

Authors:  Gregory L Damhorst; Carlos Duarte-Guevara; Weili Chen; Tanmay Ghonge; Brian T Cunningham; Rashid Bashir
Journal:  Engineering (Beijing)       Date:  2015-10-16       Impact factor: 7.553

9.  Solar thermal polymerase chain reaction for smartphone-assisted molecular diagnostics.

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Review 10.  Smartphone-based clinical diagnostics: towards democratization of evidence-based health care.

Authors:  I Hernández-Neuta; F Neumann; J Brightmeyer; T Ba Tis; N Madaboosi; Q Wei; A Ozcan; M Nilsson
Journal:  J Intern Med       Date:  2018-09-12       Impact factor: 8.989

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  5 in total

1.  Towards the use of a smartphone imaging-based tool for point-of-care detection of asymptomatic low-density malaria parasitaemia.

Authors:  Ashlee J Colbert; Katrina Co; Giselle Lima-Cooper; Dong Hoon Lee; Katherine N Clayton; Steven T Wereley; Chandy C John; Jacqueline C Linnes; Tamara L Kinzer-Ursem
Journal:  Malar J       Date:  2021-09-25       Impact factor: 3.469

Review 2.  Molecular Diagnostic Tools Applied for Assessing Microbial Water Quality.

Authors:  Lisa Paruch
Journal:  Int J Environ Res Public Health       Date:  2022-04-22       Impact factor: 4.614

3.  Usability of Rapid Cholera Detection Device (OmniVis) for Water Quality Workers in Bangladesh: Iterative Convergent Mixed Methods Study.

Authors:  Theresa L Rager; Cristian Koepfli; Wasif A Khan; Sabeena Ahmed; Zahid Hayat Mahmud; Katherine N Clayton
Journal:  J Med Internet Res       Date:  2021-05-12       Impact factor: 5.428

4.  PD-LAMP smartphone detection of SARS-CoV-2 on chip.

Authors:  Ashlee J Colbert; Dong Hoon Lee; Katherine N Clayton; Steven T Wereley; Jacqueline C Linnes; Tamara L Kinzer-Ursem
Journal:  Anal Chim Acta       Date:  2022-03-09       Impact factor: 6.911

5.  Rotational diffusometric sensor with isothermal amplification for ultra-sensitive and rapid detection of SARS-CoV-2 nsp2 cDNA.

Authors:  Dhrubajyoti Das; Cheng-Wen Lin; Jae-Sung Kwon; Han-Sheng Chuang
Journal:  Biosens Bioelectron       Date:  2022-04-20       Impact factor: 12.545

  5 in total

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