Literature DB >> 21976758

Rapid, simple, and sensitive detection of Anaplasma phagocytophilum by loop-mediated isothermal amplification of the msp2 gene.

Lei Pan1, Lijuan Zhang, Guiqiang Wang, Qinghui Liu, Yanyan Yu, Shiwen Wang, Huilan Yu, Jing He.   

Abstract

Anaplasma phagocytophilum is the causative agent of human granulocytic anaplasmosis, which is prevalent throughout China. In this study, we describe a rapid, simple, and sensitive loop-mediated isothermal amplification (LAMP) assay targeting the msp2 gene of A. phagocytophilum that is ideal for application in rural areas in China. This assay has the potential to detect A. phagocytophilum early in infection as an alternative to existing methods. A total of 42 suspected cases of infection with A. phagocytophilum, 15 serologically confirmed and 27 probable cases, were analyzed by the msp2 LAMP assay. To validate the accuracy of LAMP, previously established nested-PCR and real-time PCR assays were utilized. The sensitivity of LAMP was 25 copies per reaction (approximately 1,250 copies per ml blood) for A. phagocytophilum, and the assay did not detect false positives among 27 members of the order Rickettsiales and 17 common clinical pathogens. To evaluate the clinical applicability of the LAMP assay, a total of 42 clinical samples were examined. A positive LAMP result was obtained for 12 of the confirmed cases and for 14 of 27 suspected cases, while only 1 confirmed case and 3 cases (2 confirmed cases and 1 suspected case) were detected by nested PCR and real-time PCR, respectively. The LAMP assay described in this study demonstrated a high level of sensitivity comparable with that of nested PCR and real-time PCR for the detection of A. phagocytophilum. This LAMP assay is a valuable method for rapid, cost-effective, and simple detection of A. phagocytophilum in the rural areas of China.

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Year:  2011        PMID: 21976758      PMCID: PMC3232955          DOI: 10.1128/JCM.01085-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  17 in total

1.  Tolerance of loop-mediated isothermal amplification to a culture medium and biological substances.

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2.  Species-specific loop-mediated isothermal amplification (LAMP) for diagnosis of trypanosomosis.

Authors:  Oriel M M Thekisoe; Noritaka Kuboki; Andrew Nambota; Kozo Fujisaki; Chihiro Sugimoto; Ikuo Igarashi; Jun Yasuda; Noboru Inoue
Journal:  Acta Trop       Date:  2007-05-18       Impact factor: 3.112

3.  Simple, rapid and sensitive detection of Orientia tsutsugamushi by loop-isothermal DNA amplification.

Authors:  Daniel H Paris; Stuart D Blacksell; Paul N Newton; Nicholas P J Day
Journal:  Trans R Soc Trop Med Hyg       Date:  2008-06-18       Impact factor: 2.184

4.  Diagnosis and management of tickborne rickettsial diseases: Rocky Mountain spotted fever, ehrlichioses, and anaplasmosis--United States: a practical guide for physicians and other health-care and public health professionals.

Authors:  Alice S Chapman; Johan S Bakken; Scott M Folk; Christopher D Paddock; Karen C Bloch; Allan Krusell; Daniel J Sexton; Steven C Buckingham; Gary S Marshall; Gregory A Storch; Gregory A Dasch; Jennifer H McQuiston; David L Swerdlow; Stephen J Dumler; William L Nicholson; David H Walker; Marina E Eremeeva; Christopher A Ohl
Journal:  MMWR Recomm Rep       Date:  2006-03-31

5.  Use of real-time quantitative PCR targeting the msp2 protein gene to identify cryptic Anaplasma phagocytophilum infections in wildlife and domestic animals.

Authors:  Nicole Drazenovich; Janet Foley; Richard N Brown
Journal:  Vector Borne Zoonotic Dis       Date:  2006       Impact factor: 2.133

6.  Rapid detection of HIV-1 by reverse-transcription, loop-mediated isothermal amplification (RT-LAMP).

Authors:  Kelly A Curtis; Donna L Rudolph; S Michele Owen
Journal:  J Virol Methods       Date:  2008-06-03       Impact factor: 2.014

7.  Nosocomial transmission of human granulocytic anaplasmosis in China.

Authors:  Lijuan Zhang; Yan Liu; Daxin Ni; Qun Li; Yanlin Yu; Xue-jie Yu; Kanglin Wan; Dexin Li; Guodong Liang; Xiugao Jiang; Huaiqi Jing; Jing Run; Mingchun Luan; Xiuping Fu; Jingshan Zhang; Weizhong Yang; Yu Wang; J Stephen Dumler; Zijian Feng; Jun Ren; Jianguo Xu
Journal:  JAMA       Date:  2008-11-19       Impact factor: 56.272

8.  Rapid and sensitive detection of Singapore grouper iridovirus by loop-mediated isothermal amplification.

Authors:  X L Mao; S Zhou; D Xu; J Gong; H C Cui; Q W Qin
Journal:  J Appl Microbiol       Date:  2008-02-29       Impact factor: 3.772

9.  Loop-mediated isothermal amplification method for differentiation and rapid detection of Taenia species.

Authors:  Agathe Nkouawa; Yasuhito Sako; Minoru Nakao; Kazuhiro Nakaya; Akira Ito
Journal:  J Clin Microbiol       Date:  2008-11-12       Impact factor: 5.948

Review 10.  Current management of human granulocytic anaplasmosis, human monocytic ehrlichiosis and Ehrlichia ewingii ehrlichiosis.

Authors:  Rachael J Thomas; J Stephen Dumler; Jason A Carlyon
Journal:  Expert Rev Anti Infect Ther       Date:  2009-08       Impact factor: 5.854

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  10 in total

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Authors:  Le Jiang; Philip Ching; Chien-Chung Chao; J Stephen Dumler; Wei-Mei Ching
Journal:  J Clin Microbiol       Date:  2020-04-23       Impact factor: 5.948

2.  Rapid, simple, and sensitive detection of the ompB gene of spotted fever group rickettsiae by loop-mediated isothermal amplification.

Authors:  Lei Pan; Lijuan Zhang; Guiqiang Wang; Qinghui Liu
Journal:  BMC Infect Dis       Date:  2012-10-11       Impact factor: 3.090

3.  Candidatus Neoehrlichia mikurensis in rodents in an area with sympatric existence of the hard ticks Ixodes ricinus and Dermacentor reticulatus, Germany.

Authors:  Cornelia Silaghi; Dietlinde Woll; Monia Mahling; Kurt Pfister; Martin Pfeffer
Journal:  Parasit Vectors       Date:  2012-12-07       Impact factor: 3.876

4.  Efficient Detection of Pathogenic Leptospires Using 16S Ribosomal RNA.

Authors:  Brian T Backstedt; Ozlem Buyuktanir; Janet Lindow; Elsio A Wunder; Mitermayer G Reis; Sahar Usmani-Brown; Michel Ledizet; Albert Ko; Utpal Pal
Journal:  PLoS One       Date:  2015-06-19       Impact factor: 3.240

5.  Development of Loop-Mediated Isothermal Amplification (LAMP) assay for rapid detection of Fusarium oxysporum f. sp. ciceris - wilt pathogen of chickpea.

Authors:  Raju Ghosh; Avuthu Nagavardhini; Anindita Sengupta; Mamta Sharma
Journal:  BMC Res Notes       Date:  2015-02-11

6.  First detection and identification of Candidatus Neoehrlichia mikurensis in South Korea.

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Journal:  PLoS One       Date:  2018-12-28       Impact factor: 3.240

7.  Recombinase polymerase amplification (RPA) with lateral flow detection for three Anaplasma species of importance to livestock health.

Authors:  Andrea Salazar; Francisco M Ochoa-Corona; Justin L Talley; Bruce H Noden
Journal:  Sci Rep       Date:  2021-08-05       Impact factor: 4.379

8.  Molecular analysis of Anaplasma phagocytophilum isolated from patients with febrile diseases of unknown etiology in China.

Authors:  Lijuan Zhang; Guiqiang Wang; Qinghui Liu; Chuangfu Chen; Jun Li; Bo Long; Hong Yu; Zhilun Zhang; Jing He; Zhangyi Qu; Jiguang Yu; Yuanni Liu; Tuo Dong; Na Yao; Yong Wang; Xueqin Cheng; Jianguo Xu
Journal:  PLoS One       Date:  2013-02-22       Impact factor: 3.240

9.  Development of a loop-mediated isothermal amplification (LAMP) assay for rapid screening of ticks and fleas for spotted fever group rickettsia.

Authors:  Bruce H Noden; Jaclyn Martin; Yisel Carrillo; Justin L Talley; Francisco M Ochoa-Corona
Journal:  PLoS One       Date:  2018-02-01       Impact factor: 3.240

10.  Evaluation of a rapid detection for Coxsackievirus B3 using one-step reverse transcription loop-mediated isothermal amplification (RT-LAMP).

Authors:  A Monazah; M Zeinoddini; A R Saeeidinia
Journal:  J Virol Methods       Date:  2017-04-21       Impact factor: 2.014

  10 in total

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