Literature DB >> 19781650

A modified damped Richardson-Lucy algorithm to reduce isotropic background effects in spherical deconvolution.

Flavio Dell'acqua1, Paola Scifo, Giovanna Rizzo, Marco Catani, Andrew Simmons, Giuseppe Scotti, Ferruccio Fazio.   

Abstract

Spherical deconvolution methods have been applied to diffusion MRI to improve diffusion tensor tractography results in brain regions with multiple fibre crossing. Recent developments, such as the introduction of non-negative constraints on the solution, allow a more accurate estimation of fibre orientations by reducing instability effects due to noise robustness. Standard convolution methods do not, however, adequately model the effects of partial volume from isotropic tissue, such as gray matter, or cerebrospinal fluid, which may degrade spherical deconvolution results. Here we use a newly developed spherical deconvolution algorithm based on an adaptive regularization (damped version of the Richardson-Lucy algorithm) to reduce isotropic partial volume effects. Results from both simulated and in vivo datasets show that, compared to a standard non-negative constrained algorithm, the damped Richardson-Lucy algorithm reduces spurious fibre orientations and preserves angular resolution of the main fibre orientations. These findings suggest that, in some brain regions, non-negative constraints alone may not be sufficient to reduce spurious fibre orientations. Considering both the speed of processing and the scan time required, this new method has the potential for better characterizing white matter anatomy and the integrity of pathological tissue.

Mesh:

Year:  2009        PMID: 19781650     DOI: 10.1016/j.neuroimage.2009.09.033

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  111 in total

1.  Can spherical deconvolution provide more information than fiber orientations? Hindrance modulated orientational anisotropy, a true-tract specific index to characterize white matter diffusion.

Authors:  Flavio Dell'Acqua; Andrew Simmons; Steven C R Williams; Marco Catani
Journal:  Hum Brain Mapp       Date:  2012-04-05       Impact factor: 5.038

Review 2.  Challenges in diffusion MRI tractography - Lessons learned from international benchmark competitions.

Authors:  Kurt G Schilling; Alessandro Daducci; Klaus Maier-Hein; Cyril Poupon; Jean-Christophe Houde; Vishwesh Nath; Adam W Anderson; Bennett A Landman; Maxime Descoteaux
Journal:  Magn Reson Imaging       Date:  2018-11-29       Impact factor: 2.546

3.  A lateralized brain network for visuospatial attention.

Authors:  Michel Thiebaut de Schotten; Flavio Dell'Acqua; Stephanie J Forkel; Andrew Simmons; Francesco Vergani; Declan G M Murphy; Marco Catani
Journal:  Nat Neurosci       Date:  2011-09-18       Impact factor: 24.884

4.  Disentangling the relation between left temporoparietal white matter and reading: A spherical deconvolution tractography study.

Authors:  Jolijn Vanderauwera; Maaike Vandermosten; Flavio Dell'Acqua; Jan Wouters; Pol Ghesquière
Journal:  Hum Brain Mapp       Date:  2015-06-03       Impact factor: 5.038

5.  Histologically derived fiber response functions for diffusion MRI vary across white matter fibers-An ex vivo validation study in the squirrel monkey brain.

Authors:  Kurt G Schilling; Yurui Gao; Iwona Stepniewska; Vaibhav Janve; Bennett A Landman; Adam W Anderson
Journal:  NMR Biomed       Date:  2019-03-25       Impact factor: 4.044

6.  Cortico-thalamic disconnection in a patient with supernumerary phantom limb.

Authors:  Clémence Bourlon; Marika Urbanski; Romain Quentin; Christophe Duret; Eric Bardinet; Paolo Bartolomeo; Alexia Bourgeois
Journal:  Exp Brain Res       Date:  2017-07-27       Impact factor: 1.972

7.  Mapping fine-scale anatomy of gray matter, white matter, and trigeminal-root region applying spherical deconvolution to high-resolution 7-T diffusion MRI.

Authors:  Ralf Lützkendorf; Robin M Heidemann; Thorsten Feiweier; Michael Luchtmann; Sebastian Baecke; Jörn Kaufmann; Jörg Stadler; Eike Budinger; Johannes Bernarding
Journal:  MAGMA       Date:  2018-09-17       Impact factor: 2.310

8.  Effector-dependent neglect and splenial disconnection: a spherical deconvolution tractography study.

Authors:  Marine Lunven; Michel Thiebaut De Schotten; Bertrand Glize; Raffaella Migliaccio; Sophie Jacquin-Courtois; François Cotton; Paolo Bartolomeo; Gilles Rode
Journal:  Exp Brain Res       Date:  2014-08-13       Impact factor: 1.972

9.  Mean apparent propagator (MAP) MRI: a novel diffusion imaging method for mapping tissue microstructure.

Authors:  Evren Özarslan; Cheng Guan Koay; Timothy M Shepherd; Michal E Komlosh; M Okan İrfanoğlu; Carlo Pierpaoli; Peter J Basser
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

10.  Sheet Probability Index (SPI): Characterizing the geometrical organization of the white matter with diffusion MRI.

Authors:  Chantal M W Tax; Tom Dela Haije; Andrea Fuster; Carl-Fredrik Westin; Max A Viergever; Luc Florack; Alexander Leemans
Journal:  Neuroimage       Date:  2016-07-25       Impact factor: 6.556

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