Literature DB >> 18679436

The multiple lives of NMD factors: balancing roles in gene and genome regulation.

Olaf Isken1, Lynne E Maquat.   

Abstract

Nonsense-mediated mRNA decay (NMD) largely functions to ensure the quality of gene expression. However, NMD is also crucial to regulating appropriate expression levels for certain genes and for maintaining genome stability. Furthermore, just as NMD serves cells in multiple ways, so do its constituent proteins. Recent studies have clarified that UPF and SMG proteins, which were originally discovered to function in NMD, also have roles in other pathways, including specialized pathways of mRNA decay, DNA synthesis and cell-cycle progression, and the maintenance of telomeres. These findings suggest a delicate balance of metabolic events - some not obviously related to NMD - that can be influenced by the cellular abundance, location and activity of NMD factors and their binding partners.

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Year:  2008        PMID: 18679436      PMCID: PMC3711694          DOI: 10.1038/nrg2402

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  132 in total

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4.  The structural basis for the interaction between nonsense-mediated mRNA decay factors UPF2 and UPF3.

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Journal:  Nat Struct Mol Biol       Date:  2004-03-07       Impact factor: 15.369

5.  Identification of delta helicase as the bovine homolog of HUPF1: demonstration of an interaction with the third subunit of DNA polymerase delta.

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Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

6.  Separable roles for rent1/hUpf1 in altered splicing and decay of nonsense transcripts.

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7.  An eIF4AIII-containing complex required for mRNA localization and nonsense-mediated mRNA decay.

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8.  Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay.

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9.  A nuclear translation-like factor eIF4AIII is recruited to the mRNA during splicing and functions in nonsense-mediated decay.

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Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-15       Impact factor: 11.205

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  180 in total

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2.  The exon junction complex differentially marks spliced junctions.

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

Review 4.  Proofreading and spellchecking: a two-tier strategy for pre-mRNA splicing quality control.

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Review 5.  NMD mechanism and the functions of Upf proteins in plant.

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Review 6.  Characteristics of circular RNAs generated by human Survival Motor Neuron genes.

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Review 7.  Nonsense-mediated RNA decay regulation by cellular stress: implications for tumorigenesis.

Authors:  Lawrence B Gardner
Journal:  Mol Cancer Res       Date:  2010-02-23       Impact factor: 5.852

8.  A novel allele of myosin VIIa reveals a critical function for the C-terminal FERM domain for melanosome transport in retinal pigment epithelial cells.

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Review 10.  Intrusion of a DNA repair protein in the RNome world: is this the beginning of a new era?

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Journal:  Mol Cell Biol       Date:  2009-11-09       Impact factor: 4.272

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