Literature DB >> 29544676

Eukaryotic RNA 5'-End NAD+ Capping and DeNADding.

Megerditch Kiledjian1.   

Abstract

A hallmark of eukaryotic mRNAs has long been the 5'-end m7G cap. This paradigm was recently amended by recent reports that Saccharomyces cerevisiae and mammalian cells also contain mRNAs carrying a novel nicotinamide adenine dinucleotide (NAD+) cap at their 5'-end. The presence of an NAD+ cap on mRNA uncovers a previously unknown mechanism for controlling gene expression through nucleotide metabolite-directed mRNA turnover. In contrast to the m7G cap that stabilizes mRNA, the NAD+ cap targets RNA for rapid decay in mammalian cells through the DXO non-canonical decapping enzyme which removes intact NAD+ from RNA in a process termed 'deNADding'. This review highlights the identification of NAD+ caps, their mode of addition, and their functional significance in cells.
Copyright © 2018 Elsevier Ltd. All rights reserved.

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Year:  2018        PMID: 29544676      PMCID: PMC5962413          DOI: 10.1016/j.tcb.2018.02.005

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  71 in total

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Review 4.  Molecular control of vertebrate iron homeostasis by iron regulatory proteins.

Authors:  Michelle L Wallander; Elizabeth A Leibold; Richard S Eisenstein
Journal:  Biochim Biophys Acta       Date:  2006-05-17

5.  Identification of NAD+ capped mRNAs in Saccharomyces cerevisiae.

Authors:  Robert W Walters; Tyler Matheny; Laura S Mizoue; Bhalchandra S Rao; Denise Muhlrad; Roy Parker
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-28       Impact factor: 11.205

6.  Interdependence of AMPK and SIRT1 for metabolic adaptation to fasting and exercise in skeletal muscle.

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Review 7.  More than just scanning: the importance of cap-independent mRNA translation initiation for cellular stress response and cancer.

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Journal:  Cell Mol Life Sci       Date:  2016-12-02       Impact factor: 9.261

8.  Identification of a quality-control mechanism for mRNA 5'-end capping.

Authors:  Xinfu Jiao; Song Xiang; Chanseok Oh; Charles E Martin; Liang Tong; Megerditch Kiledjian
Journal:  Nature       Date:  2010-08-29       Impact factor: 49.962

9.  Cloning, purification, and properties of a novel NADH pyrophosphatase. Evidence for a nucleotide pyrophosphatase catalytic domain in MutT-like enzymes.

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Journal:  J Biol Chem       Date:  1995-01-27       Impact factor: 5.157

Review 10.  RNA damage in biological conflicts and the diversity of responding RNA repair systems.

Authors:  A Maxwell Burroughs; L Aravind
Journal:  Nucleic Acids Res       Date:  2016-08-17       Impact factor: 16.971

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  34 in total

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Authors:  Xiaolu A Cambronne; W Lee Kraus
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2.  5' and 3' modifications controlling RNA degradation: from safeguards to executioners.

Authors:  Dominique Gagliardi; Andrzej Dziembowski
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

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Journal:  Plant Physiol       Date:  2019-11-20       Impact factor: 8.340

4.  Fluorescent probe displacement assays reveal unique nucleic acid binding properties of human nudix enzymes.

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Journal:  Anal Biochem       Date:  2020-02-12       Impact factor: 3.365

5.  SPAAC-NAD-seq, a sensitive and accurate method to profile NAD+-capped transcripts.

Authors:  Hao Hu; Nora Flynn; Hailei Zhang; Chenjiang You; Runlai Hang; Xufeng Wang; Huan Zhong; Zhulong Chan; Yiji Xia; Xuemei Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-30       Impact factor: 11.205

Review 6.  A recap of RNA recapping.

Authors:  Jackson B Trotman; Daniel R Schoenberg
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-09-05       Impact factor: 9.957

7.  Molecular mechanism for the inhibition of DXO by adenosine 3',5'-bisphosphate.

Authors:  Ji-Sook Yun; Je-Hyun Yoon; Young Jun Choi; Young Jin Son; Sunghwan Kim; Liang Tong; Jeong Ho Chang
Journal:  Biochem Biophys Res Commun       Date:  2018-09-01       Impact factor: 3.575

Review 8.  Structural and molecular mechanisms for the control of eukaryotic 5'-3' mRNA decay.

Authors:  Jeffrey S Mugridge; Jeff Coller; John D Gross
Journal:  Nat Struct Mol Biol       Date:  2018-12-05       Impact factor: 15.369

Review 9.  mRNA cap regulation in mammalian cell function and fate.

Authors:  Alison Galloway; Victoria H Cowling
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2018-10-09       Impact factor: 4.490

10.  Discovery of cellular substrates of human RNA-decapping enzyme DCP2 using a stapled bicyclic peptide inhibitor.

Authors:  Yang Luo; Jeremy A Schofield; Zhenkun Na; Tanja Hann; Matthew D Simon; Sarah A Slavoff
Journal:  Cell Chem Biol       Date:  2020-12-22       Impact factor: 8.116

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