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Literature DB >> 19706510

Genome-wide location analysis reveals a role for Sub1 in RNA polymerase III transcription.

Arounie Tavenet¹, Audrey Suleau, Géraldine Dubreuil, Roberto Ferrari, Cécile Ducrot, Magali Michaut, Jean-Christophe Aude, Giorgio Dieci, Olivier Lefebvre, Christine Conesa, Joël Acker.

Abstract

Human PC4 and the yeast ortholog Sub1 have multiple functions in RNA polymerase II transcription. Genome-wide mapping revealed that Sub1 is present on Pol III-transcribed genes. Sub1 was found to interact with components of the Pol III transcription system and to stimulate the initiation and reinitiation steps in a system reconstituted with all recombinant factors. Sub1 was required for optimal Pol III gene transcription in exponentially growing cells.

Entities: Gene Species

Mesh：

Substances：

Year: 2009 PMID： 19706510 PMCID： PMC2725013 DOI： 10.1073/pnas.0900162106

Source DB: PubMed Journal: Proc Natl Acad Sci U S A ISSN： 0027-8424 Impact factor: 11.205

41 in total

1. TFIIIC-independent in vitro transcription of yeast tRNA genes.

Authors: G Dieci; R Percudani; S Giuliodori; L Bottarelli; S Ottonello
Journal: J Mol Biol Date: 2000-06-09 Impact factor: 5.469

2. p300-mediated acetylation of human transcriptional coactivator PC4 is inhibited by phosphorylation.

Authors: B R Kumar; V Swaminathan; S Banerjee; T K Kundu
Journal: J Biol Chem Date: 2001-02-14 Impact factor: 5.157

3. General repression of RNA polymerase III transcription is triggered by protein phosphatase type 2A-mediated dephosphorylation of Maf1.

Authors: Danuta Oficjalska-Pham; Olivier Harismendy; Wieslaw J Smagowicz; Anne Gonzalez de Peredo; Magdalena Boguta; André Sentenac; Olivier Lefebvre
Journal: Mol Cell Date: 2006-06-09 Impact factor: 17.970

4. Transcriptional coactivator PC4, a chromatin-associated protein, induces chromatin condensation.

Authors: Chandrima Das; Kohji Hizume; Kiran Batta; B R Prashanth Kumar; Shrikanth S Gadad; Semanti Ganguly; Stephanie Lorain; Alain Verreault; Parag P Sadhale; Kunio Takeyasu; Tapas K Kundu
Journal: Mol Cell Biol Date: 2006-09-18 Impact factor: 4.272

5. Different functional modes of p300 in activation of RNA polymerase III transcription from chromatin templates.

Authors: Claudia Mertens; Robert G Roeder
Journal: Mol Cell Biol Date: 2008-07-21 Impact factor: 4.272

6. Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription.

Authors: Yad Ghavi-Helm; Magali Michaut; Joël Acker; Jean-Christophe Aude; Pierre Thuriaux; Michel Werner; Julie Soutourina
Journal: Genes Dev Date: 2008-07-15 Impact factor: 11.361

7. A basal transcription factor that activates or represses transcription.

Authors: P J Willy; R Kobayashi; J T Kadonaga
Journal: Science Date: 2000-11-03 Impact factor: 47.728

8. Transcriptional repression of the IMD2 gene mediated by the transcriptional co-activator Sub1.

Authors: Hiroshi Koyama; Eriko Sumiya; Makiko Nagata; Takahiro Ito; Kazuhisa Sekimizu
Journal: Genes Cells Date: 2008-09-23 Impact factor: 1.891

9. Positive modulation of RNA polymerase III transcription by ribosomal proteins.

Authors: Giorgio Dieci; Roberta Ruotolo; Priscilla Braglia; Christophe Carles; Andrea Carpentieri; Angela Amoresano; Simone Ottonello
Journal: Biochem Biophys Res Commun Date: 2008-12-29 Impact factor: 3.575

10. The transcription reinitiation properties of RNA polymerase III in the absence of transcription factors.

Authors: Roberto Ferrari; Giorgio Dieci
Journal: Cell Mol Biol Lett Date: 2007-10-29 Impact factor: 5.787

28 in total

Review 1. Cell growth- and differentiation-dependent regulation of RNA polymerase III transcription.

Authors: Hélène Dumay-Odelot; Stéphanie Durrieu-Gaillard; Daniel Da Silva; Robert G Roeder; Martin Teichmann
Journal: Cell Cycle Date: 2010-09-01 Impact factor: 4.534

Review 2. Investigating transcription reinitiation through in vitro approaches.

Authors: Giorgio Dieci; Beatrice Fermi; Maria Cristina Bosio
Journal: Transcription Date: 2014

3. Yeast transcription co-activator Sub1 and its human homolog PC4 preferentially bind to G-quadruplex DNA.

Authors: Jun Gao; Boris L Zybailov; Alicia K Byrd; Wezley C Griffin; Shubeena Chib; Samuel G Mackintosh; Alan J Tackett; Kevin D Raney
Journal: Chem Commun (Camb) Date: 2015-04-28 Impact factor: 6.222

Review 4. Synonymous codons, ribosome speed, and eukaryotic gene expression regulation.

Authors: Daniel Tarrant; Tobias von der Haar
Journal: Cell Mol Life Sci Date: 2014-07-20 Impact factor: 9.261

5. Sub1 and RPA associate with RNA polymerase II at different stages of transcription.

Authors: Timothy W Sikorski; Scott B Ficarro; John Holik; TaeSoo Kim; Oliver J Rando; Jarrod A Marto; Stephen Buratowski
Journal: Mol Cell Date: 2011-11-04 Impact factor: 17.970

Review 6. Regulation of pol III transcription by nutrient and stress signaling pathways.

Authors: Robyn D Moir; Ian M Willis
Journal: Biochim Biophys Acta Date: 2012-11-16

Review 7. Contributions of in vitro transcription to the understanding of human RNA polymerase III transcription.

Authors: Hélène Dumay-Odelot; Stéphanie Durrieu-Gaillard; Leyla El Ayoubi; Camila Parrot; Martin Teichmann
Journal: Transcription Date: 2014

Review 8. Sub1/PC4, a multifaceted factor: from transcription to genome stability.

Authors: Miguel Garavís; Olga Calvo
Journal: Curr Genet Date: 2017-05-31 Impact factor: 3.886

9. From structure to systems: high-resolution, quantitative genetic analysis of RNA polymerase II.

Authors: Hannes Braberg; Huiyan Jin; Erica A Moehle; Yujia A Chan; Shuyi Wang; Michael Shales; Joris J Benschop; John H Morris; Chenxi Qiu; Fuqu Hu; Leung K Tang; James S Fraser; Frank C P Holstege; Philip Hieter; Christine Guthrie; Craig D Kaplan; Nevan J Krogan
Journal: Cell Date: 2013-08-08 Impact factor: 41.582

10. RNA polymerase III mutants in TFIIFα-like C37 that cause terminator readthrough with no decrease in transcription output.

Authors: Keshab Rijal; Richard J Maraia
Journal: Nucleic Acids Res Date: 2012-10-23 Impact factor: 16.971