Literature DB >> 25764111

Contributions of in vitro transcription to the understanding of human RNA polymerase III transcription.

Hélène Dumay-Odelot1, Stéphanie Durrieu-Gaillard, Leyla El Ayoubi, Camila Parrot, Martin Teichmann.   

Abstract

Human RNA polymerase III transcribes small untranslated RNAs that contribute to the regulation of essential cellular processes, including transcription, RNA processing and translation. Analysis of this transcription system by in vitro transcription techniques has largely contributed to the discovery of its transcription factors and to the understanding of the regulation of human RNA polymerase III transcription. Here we review some of the key steps that led to the identification of transcription factors and to the definition of minimal promoter sequences for human RNA polymerase III transcription.

Entities:  

Keywords:  Human RNA polymerase III; PTF; SNAPC; TFIIIA; TFIIIB; TFIIIC; activated transcription; basal transcription; enhancer; in vitro; promoter

Mesh:

Substances:

Year:  2014        PMID: 25764111      PMCID: PMC4214236          DOI: 10.4161/trns.27526

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  140 in total

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Journal:  Genes Dev       Date:  1991-08       Impact factor: 11.361

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Journal:  Science       Date:  1991-01-25       Impact factor: 47.728

4.  Evolution of vault RNAs.

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Journal:  Mol Biol Evol       Date:  2009-06-02       Impact factor: 16.240

5.  Isolation of coactivators associated with the TATA-binding protein that mediate transcriptional activation.

Authors:  B D Dynlacht; T Hoey; R Tjian
Journal:  Cell       Date:  1991-08-09       Impact factor: 41.582

6.  Sub1 functions in osmoregulation and in transcription by both RNA polymerases II and III.

Authors:  Emanuel Rosonina; Ian M Willis; James L Manley
Journal:  Mol Cell Biol       Date:  2009-02-09       Impact factor: 4.272

7.  Cloning of a human gene encoding the general transcription initiation factor IIB.

Authors:  I Ha; W S Lane; D Reinberg
Journal:  Nature       Date:  1991-08-22       Impact factor: 49.962

8.  TFIID is required for in vitro transcription of the human U6 gene by RNA polymerase III.

Authors:  K A Simmen; J Bernués; H D Parry; H G Stunnenberg; A Berkenstam; B Cavallini; J M Egly; I W Mattaj
Journal:  EMBO J       Date:  1991-07       Impact factor: 11.598

9.  tRNAdb 2009: compilation of tRNA sequences and tRNA genes.

Authors:  Frank Jühling; Mario Mörl; Roland K Hartmann; Mathias Sprinzl; Peter F Stadler; Joern Pütz
Journal:  Nucleic Acids Res       Date:  2008-10-28       Impact factor: 16.971

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Authors:  R Waldschmidt; I Wanandi; K H Seifart
Journal:  EMBO J       Date:  1991-09       Impact factor: 11.598

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  10 in total

1.  RNA polymerase III accurately initiates transcription from RNA polymerase II promoters in vitro.

Authors:  Sascha H C Duttke
Journal:  J Biol Chem       Date:  2014-06-10       Impact factor: 5.157

2.  Regulation of RNA polymerase III transcription during transformation of human IMR90 fibroblasts with defined genetic elements.

Authors:  Stéphanie Durrieu-Gaillard; Hélène Dumay-Odelot; Galina Boldina; Nicolas J Tourasse; Delphine Allard; Fabrice André; Françoise Macari; Armelle Choquet; Pauline Lagarde; Guillaume Drutel; Thierry Leste-Lasserre; Marion Petitet; Tom Lesluyes; Lydia Lartigue-Faustin; Jean-William Dupuy; Frédéric Chibon; Robert G Roeder; Dominique Joubert; Stéphan Vagner; Martin Teichmann
Journal:  Cell Cycle       Date:  2018-01-22       Impact factor: 4.534

Review 3.  Signaling to and from the RNA Polymerase III Transcription and Processing Machinery.

Authors:  Ian M Willis; Robyn D Moir
Journal:  Annu Rev Biochem       Date:  2018-01-12       Impact factor: 23.643

4.  Gene-Specific Control of tRNA Expression by RNA Polymerase II.

Authors:  Alan Gerber; Keiichi Ito; Chi-Shuen Chu; Robert G Roeder
Journal:  Mol Cell       Date:  2020-04-15       Impact factor: 17.970

Review 5.  50+ years of eukaryotic transcription: an expanding universe of factors and mechanisms.

Authors:  Robert G Roeder
Journal:  Nat Struct Mol Biol       Date:  2019-08-22       Impact factor: 15.369

6.  Mutation in POLR3K causes hypomyelinating leukodystrophy and abnormal ribosomal RNA regulation.

Authors:  Imen Dorboz; Hélene Dumay-Odelot; Karima Boussaid; Yosra Bouyacoub; Pauline Barreau; Simon Samaan; Haifa Jmel; Eleonore Eymard-Pierre; Claude Cances; Céline Bar; Anne-Lise Poulat; Christophe Rousselle; Florence Renaldo; Monique Elmaleh-Bergès; Martin Teichmann; Odile Boespflug-Tanguy
Journal:  Neurol Genet       Date:  2018-12-03

7.  Leukodystrophy-associated POLR3A mutations down-regulate the RNA polymerase III transcript and important regulatory RNA BC200.

Authors:  Karine Choquet; Diane Forget; Elisabeth Meloche; Marie-Josée Dicaire; Geneviève Bernard; Adeline Vanderver; Raphael Schiffmann; Marc R Fabian; Martin Teichmann; Benoit Coulombe; Bernard Brais; Claudia L Kleinman
Journal:  J Biol Chem       Date:  2019-03-21       Impact factor: 5.157

8.  Timing RNA polymerase pausing with TV-PRO-seq.

Authors:  Jie Zhang; Massimo Cavallaro; Daniel Hebenstreit
Journal:  Cell Rep Methods       Date:  2021-10-25

9.  The hRPC62 subunit of human RNA polymerase III displays helicase activity.

Authors:  Leyla El Ayoubi; Hélène Dumay-Odelot; Aleksandar Chernev; Fanny Boissier; Lionel Minvielle-Sébastia; Henning Urlaub; Sébastien Fribourg; Martin Teichmann
Journal:  Nucleic Acids Res       Date:  2019-11-04       Impact factor: 16.971

10.  Lytic Infection with Murine Gammaherpesvirus 68 Activates Host and Viral RNA Polymerase III Promoters and Enhances Noncoding RNA Expression.

Authors:  Ashley N Knox; Alice Mueller; Eva M Medina; Eric T Clambey; Linda F van Dyk
Journal:  J Virol       Date:  2021-06-24       Impact factor: 5.103

  10 in total

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