Literature DB >> 19703647

Small RNAs and developmental timing in plants.

R Scott Poethig1.   

Abstract

MicroRNAs (miRNAs) were originally discovered as regulators of developmental timing in C. elegans. Recent results have revealed that miRNAs also regulate developmental timing in plants, and have provided a long-awaited molecular connection between the juvenile-to-adult transition and flowering. Specifically, the transition from juvenile to adult development in flowering plants is regulated by two temporally expressed miRNAs, miR156 and miR172. These miRNAs target two families of plant-specific transcription factors (respectively, SBP-box and AP2-like factors) that cooperate to regulate phase-specific vegetative traits, as well as genes involved in flowering. Small RNAs have also been shown to play a role in the transition between different stages of gametophyte development in the moss Physcomitrella patens. The use of small RNAs for temporal regulation is therefore quite ancient in plants.

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Year:  2009        PMID: 19703647      PMCID: PMC2765200          DOI: 10.1016/j.gde.2009.06.001

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  50 in total

1.  Dissection of floral induction pathways using global expression analysis.

Authors:  Markus Schmid; N Henriette Uhlenhaut; François Godard; Monika Demar; Ray Bressan; Detlef Weigel; Jan U Lohmann
Journal:  Development       Date:  2003-10-22       Impact factor: 6.868

2.  The miRNA156/157 recognition element in the 3' UTR of the Arabidopsis SBP box gene SPL3 prevents early flowering by translational inhibition in seedlings.

Authors:  Madhuri Gandikota; Rainer P Birkenbihl; Susanne Höhmann; Guillermo H Cardon; Heinz Saedler; Peter Huijser
Journal:  Plant J       Date:  2007-01-08       Impact factor: 6.417

3.  Molecular evolution and selection of a gene encoding two tandem microRNAs in rice.

Authors:  Sheng Wang; Qian-Hao Zhu; Xingyi Guo; Yijie Gui; Jiandong Bao; Chris Helliwell; Longjiang Fan
Journal:  FEBS Lett       Date:  2007-09-12       Impact factor: 4.124

4.  Feminized tassels of maize mop1 and ts1 mutants exhibit altered levels of miR156 and specific SBP-box genes.

Authors:  Judd F Hultquist; Jane E Dorweiler
Journal:  Planta       Date:  2008-09-18       Impact factor: 4.116

5.  Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family.

Authors:  An-Yuan Guo; Qi-Hui Zhu; Xiaocheng Gu; Song Ge; Ji Yang; Jingchu Luo
Journal:  Gene       Date:  2008-04-09       Impact factor: 3.688

6.  Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3.

Authors:  Gang Wu; R Scott Poethig
Journal:  Development       Date:  2006-08-16       Impact factor: 6.868

7.  Regulation of vegetative phase change in Arabidopsis thaliana by cyclophilin 40.

Authors:  T Z Berardini; K Bollman; H Sun; R S Poethig
Journal:  Science       Date:  2001-03-23       Impact factor: 47.728

8.  Glossy15 Controls the Epidermal Juvenile-to-Adult Phase Transition in Maize.

Authors:  S. P. Moose; P. H. Sisco
Journal:  Plant Cell       Date:  1994-10       Impact factor: 11.277

9.  The microRNA-regulated SBP-Box transcription factor SPL3 is a direct upstream activator of LEAFY, FRUITFULL, and APETALA1.

Authors:  Ayako Yamaguchi; Miin-Feng Wu; Li Yang; Gang Wu; R Scott Poethig; Doris Wagner
Journal:  Dev Cell       Date:  2009-08       Impact factor: 12.270

10.  Heterochronic effects of glossy15 mutations on epidermal cell identity in maize.

Authors:  M M Evans; H J Passas; R S Poethig
Journal:  Development       Date:  1994-07       Impact factor: 6.868

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  80 in total

1.  The function of the RNA-binding protein TEL1 in moss reveals ancient regulatory mechanisms of shoot development.

Authors:  Julien Vivancos; Lara Spinner; Christelle Mazubert; Florence Charlot; Nicolas Paquet; Vincent Thareau; Michel Dron; Fabien Nogué; Céline Charon
Journal:  Plant Mol Biol       Date:  2011-12-15       Impact factor: 4.076

Review 2.  Dicing bodies.

Authors:  Qi Liu; Leilei Shi; Yuda Fang
Journal:  Plant Physiol       Date:  2011-10-24       Impact factor: 8.340

3.  High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis.

Authors:  Natalie W Breakfield; David L Corcoran; Jalean J Petricka; Jeffrey Shen; Juthamas Sae-Seaw; Ignacio Rubio-Somoza; Detlef Weigel; Uwe Ohler; Philip N Benfey
Journal:  Genome Res       Date:  2011-09-22       Impact factor: 9.043

4.  The origin of the sporophyte shoot in land plants: a bryological perspective.

Authors:  Roberto Ligrone; Jeffrey G Duckett; Karen S Renzaglia
Journal:  Ann Bot       Date:  2012-08-07       Impact factor: 4.357

Review 5.  Epigenetic imbalance and the floral developmental abnormality of the in vitro-regenerated oil palm Elaeis guineensis.

Authors:  Estelle Jaligot; Sophie Adler; Émilie Debladis; Thierry Beulé; Frédérique Richaud; Pascal Ilbert; E Jean Finnegan; Alain Rival
Journal:  Ann Bot       Date:  2011-01-10       Impact factor: 4.357

6.  Anti-DNA:RNA antibodies and silicon photonic microring resonators: increased sensitivity for multiplexed microRNA detection.

Authors:  Abraham J Qavi; Jared T Kindt; Martin A Gleeson; Ryan C Bailey
Journal:  Anal Chem       Date:  2011-06-29       Impact factor: 6.986

Review 7.  Epigenetic regulation in plants.

Authors:  Craig S Pikaard; Ortrun Mittelsten Scheid
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-12-01       Impact factor: 10.005

8.  Characterization on the conservation and diversification of miRNA156 gene family from lower to higher plant species based on phylogenetic analysis at the whole genomic level.

Authors:  Chen Wang; Qinglian Wang; Xudong Zhu; Menjie Cui; Haifeng Jia; Wenying Zhang; Wei Tang; Xiangpeng Leng; Wenbiao Shen
Journal:  Funct Integr Genomics       Date:  2019-06-07       Impact factor: 3.410

9.  The miR-379/miR-410 cluster at the imprinted Dlk1-Dio3 domain controls neonatal metabolic adaptation.

Authors:  Stéphane Labialle; Virginie Marty; Marie-Line Bortolin-Cavaillé; Magali Hoareau-Osman; Jean-Philippe Pradère; Philippe Valet; Pascal G P Martin; Jérôme Cavaillé
Journal:  EMBO J       Date:  2014-08-14       Impact factor: 11.598

10.  Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis.

Authors:  Xiangqiang Zhan; Bangshing Wang; Hongjiang Li; Renyi Liu; Rajwant K Kalia; Jian-Kang Zhu; Viswanathan Chinnusamy
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-15       Impact factor: 11.205

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