Literature DB >> 25452385

Epigenetic regulation in plants.

Craig S Pikaard1, Ortrun Mittelsten Scheid2.   

Abstract

The study of epigenetics in plants has a long and rich history, from initial descriptions of non-Mendelian gene behaviors to seminal discoveries of chromatin-modifying proteins and RNAs that mediate gene silencing in most eukaryotes, including humans. Genetic screens in the model plant Arabidopsis have been particularly rewarding, identifying more than 130 epigenetic regulators thus far. The diversity of epigenetic pathways in plants is remarkable, presumably contributing to the phenotypic plasticity of plant postembryonic development and the ability to survive and reproduce in unpredictable environments.
Copyright © 2014 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2014        PMID： 25452385      PMCID： PMC4292151          DOI： 10.1101/cshperspect.a019315

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN： 1943-0264            Impact factor:   10.005


  180 in total

1.  An epigenetic mutation responsible for natural variation in floral symmetry.

Authors:  P Cubas; C Vincent; E Coen
Journal:  Nature       Date:  1999-09-09       Impact factor: 49.962

Review 2.  Genomic imprinting in plants: observations and evolutionary implications.

Authors:  M Alleman; J Doctor
Journal:  Plant Mol Biol       Date:  2000-06       Impact factor: 4.076

Review 3.  Paramutation in maize.

Authors:  V L Chandler; W B Eggleston; J E Dorweiler
Journal:  Plant Mol Biol       Date:  2000-06       Impact factor: 4.076

4.  Transcriptional silencing and promoter methylation triggered by double-stranded RNA.

Authors:  M F Mette; W Aufsatz; J van der Winden; M A Matzke; A J Matzke
Journal:  EMBO J       Date:  2000-10-02       Impact factor: 11.598

5.  Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes.

Authors:  Ritu Pandey; Andreas Müller; Carolyn A Napoli; David A Selinger; Craig S Pikaard; Eric J Richards; Judith Bender; David W Mount; Richard A Jorgensen
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

6.  The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene.

Authors:  W J Soppe; S E Jacobsen; C Alonso-Blanco; J P Jackson; T Kakutani; M Koornneef; A J Peeters
Journal:  Mol Cell       Date:  2000-10       Impact factor: 17.970

Review 7.  Role of microRNAs in plant and animal development.

Authors:  James C Carrington; Victor Ambros
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

Review 8.  Gene silencing.

Authors:  Michael Wassenegger
Journal:  Int Rev Cytol       Date:  2002

9.  Deficient in DNA methylation 1 (DDM1) defines a novel family of chromatin-remodeling factors.

Authors:  Jan Brzeski; Andrzej Jerzmanowski
Journal:  J Biol Chem       Date:  2002-10-25       Impact factor: 5.157

10.  DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in arabidopsis.

Authors:  Yeonhee Choi; Mary Gehring; Lianna Johnson; Mike Hannon; John J Harada; Robert B Goldberg; Steven E Jacobsen; Robert L Fischer
Journal:  Cell       Date:  2002-07-12       Impact factor: 41.582
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  115 in total

Review 1.  Position-effect variegation, heterochromatin formation, and gene silencing in Drosophila.

Authors:  Sarah C R Elgin; Gunter Reuter
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-08-01       Impact factor: 10.005

Review 2.  Epigenetics of ciliates.

Authors:  Douglas L Chalker; Eric Meyer; Kazufumi Mochizuki
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

3.  Role of DNA methylation in hybrid vigor in Arabidopsis thaliana.

Authors:  Takahiro Kawanabe; Sonoko Ishikura; Naomi Miyaji; Taku Sasaki; Li Min Wu; Etsuko Itabashi; Satoko Takada; Motoki Shimizu; Takeshi Takasaki-Yasuda; Kenji Osabe; W James Peacock; Elizabeth S Dennis; Ryo Fujimoto
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-07       Impact factor: 11.205

4.  Buried in PEAT-discovery of a new silencing complex with opposing activities.

Authors:  Masayuki Tsuzuki; Andrzej T Wierzbicki
Journal:  EMBO J       Date:  2018-09-20       Impact factor: 11.598

5.  Nitric Oxide Modulates Histone Acetylation at Stress Genes by Inhibition of Histone Deacetylases.

Authors:  Alexander Mengel; Alexandra Ageeva; Elisabeth Georgii; Jörg Bernhardt; Keqiang Wu; Jörg Durner; Christian Lindermayr
Journal:  Plant Physiol       Date:  2016-12-15       Impact factor: 8.340

Review 6.  Maintenance of Epigenetic Information.

Authors:  Geneviève Almouzni; Howard Cedar
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-05-02       Impact factor: 10.005

7.  Transcriptional profiling of epigenetic regulators in somatic embryos during temperature induced formation of an epigenetic memory in Norway spruce.

Authors:  Igor A Yakovlev; Elena Carneros; YeonKyeong Lee; Jorunn E Olsen; Carl Gunnar Fossdal
Journal:  Planta       Date:  2016-02-19       Impact factor: 4.116

Review 8.  A Structural Perspective on Readout of Epigenetic Histone and DNA Methylation Marks.

Authors:  Dinshaw J Patel
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-03-01       Impact factor: 10.005

Review 9.  Creating Order from Chaos: Epigenome Dynamics in Plants with Complex Genomes.

Authors:  Nathan M Springer; Damon Lisch; Qing Li
Journal:  Plant Cell       Date:  2016-02-11       Impact factor: 11.277

Review 10.  Plant small RNAs: the essential epigenetic regulators of gene expression for salt-stress responses and tolerance.

Authors:  Vinay Kumar; Tushar Khare; Varsha Shriram; Shabir H Wani
Journal:  Plant Cell Rep       Date:  2017-09-26       Impact factor: 4.570
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