Literature DB >> 17884044

Molecular evolution and selection of a gene encoding two tandem microRNAs in rice.

Sheng Wang1, Qian-Hao Zhu, Xingyi Guo, Yijie Gui, Jiandong Bao, Chris Helliwell, Longjiang Fan.   

Abstract

It has been shown that overexpression of MIR156b/c resulted in a bushy phenotype in maize and rice. Our results indicated that the MIR156b/c locus was highly conserved among cereals, but not in dicots and that genome duplication events played an important role in the evolution of the miR156 family. Genetic diversity investigation at the locus indicated that only approximately 9% of nucleotide diversity observed in wild rice (O. rufigogon) was maintained in the cultivated rice and the neutral model was rejected (P<0.05) based on Tajima's D and Fu and Li's D( *) and F( *) tests. To our knowledge, this is the first example of miRNA gene to be targeted by both natural and domestication selection in plants.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17884044     DOI: 10.1016/j.febslet.2007.09.002

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  16 in total

1.  Identification of miRNAs in sorghum by using bioinformatics approach.

Authors:  Amit Katiyar; Shuchi Smita; Viswanathan Chinnusamy; Dev Mani Pandey; Kailash Bansal
Journal:  Plant Signal Behav       Date:  2012-02-01

2.  Genome-wide identification and evolutionary analysis of positively selected miRNA genes in domesticated rice.

Authors:  Qingpo Liu; Hong Wang; Haichao Hu; Hengmu Zhang
Journal:  Mol Genet Genomics       Date:  2014-11-02       Impact factor: 3.291

3.  Overexpression of the maize Corngrass1 microRNA prevents flowering, improves digestibility, and increases starch content of switchgrass.

Authors:  George S Chuck; Christian Tobias; Lan Sun; Florian Kraemer; Chenlin Li; Dean Dibble; Rohit Arora; Jennifer N Bragg; John P Vogel; Seema Singh; Blake A Simmons; Markus Pauly; Sarah Hake
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-10       Impact factor: 11.205

4.  Exploring the evolutionary differences of SBP-box genes targeted by miR156 and miR529 in plants.

Authors:  Li-Zhen Ling; Shu-Dong Zhang
Journal:  Genetica       Date:  2012-09-29       Impact factor: 1.082

5.  Sequence variation and selection of small RNAs in domesticated rice.

Authors:  Yu Wang; Dan Shen; Shiping Bo; Huan Chen; Jian Zheng; Qian-Hao Zhu; Daguang Cai; Chris Helliwell; Longjiang Fan
Journal:  BMC Evol Biol       Date:  2010-04-30       Impact factor: 3.260

Review 6.  Small RNAs and developmental timing in plants.

Authors:  R Scott Poethig
Journal:  Curr Opin Genet Dev       Date:  2009-08       Impact factor: 5.578

7.  Highly efficient gene silencing using perfect complementary artificial miRNA targeting AP1 or heteromeric artificial miRNA targeting AP1 and CAL genes.

Authors:  Wonkeun Park; Jixian Zhai; Jung-Youn Lee
Journal:  Plant Cell Rep       Date:  2008-12-09       Impact factor: 4.570

8.  A genome-wide characterization of microRNA genes in maize.

Authors:  Lifang Zhang; Jer-Ming Chia; Sunita Kumari; Joshua C Stein; Zhijie Liu; Apurva Narechania; Christopher A Maher; Katherine Guill; Michael D McMullen; Doreen Ware
Journal:  PLoS Genet       Date:  2009-11-20       Impact factor: 5.917

9.  Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins.

Authors:  Francisco Merchan; Adnane Boualem; Martin Crespi; Florian Frugier
Journal:  Genome Biol       Date:  2009-12-01       Impact factor: 13.583

10.  Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.

Authors:  Séverine Lacombe; Hiroshi Nagasaki; Carole Santi; David Duval; Benoît Piégu; Martine Bangratz; Jean-Christophe Breitler; Emmanuel Guiderdoni; Christophe Brugidou; Judith Hirsch; Xiaofeng Cao; Claire Brice; Olivier Panaud; Wojciech M Karlowski; Yutaka Sato; Manuel Echeverria
Journal:  BMC Plant Biol       Date:  2008-12-02       Impact factor: 4.215

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.