Literature DB >> 19631772

Bridging IRES elements in mRNAs to the eukaryotic translation apparatus.

Kerry D Fitzgerald1, Bert L Semler.   

Abstract

IRES elements are highly structured RNA sequences that function to recruit ribosomes for the initiation of translation. In contrast to the canonical cap-binding, ribosome-scanning model, the mechanism of IRES-mediated translation initiation is not well understood. IRES elements, first discovered in viral RNA genomes, were subsequently found in a subset of cellular RNAs as well. Interestingly, these cellular IRES-containing mRNAs appear to play important roles during conditions of cellular stress, development, and disease (e.g., cancer). It has been shown for viral IRESes that some require specific IRES trans-acting factors (ITAFs), while others require few if any additional proteins and can bind ribosomes directly. Current studies are aimed at elucidating the mechanism of IRES-mediated translation initiation and features that may be common or differ greatly among cellular and viral IRESes. This review will explore IRES elements as important RNA structures that function in both cellular and viral RNA translation and the significance of these structures in providing an alternative mechanism of eukaryotic translation initiation.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19631772      PMCID: PMC2783899          DOI: 10.1016/j.bbagrm.2009.07.004

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  138 in total

1.  Interaction of a cellular 57-kilodalton protein with the internal translation initiation site of foot-and-mouth disease virus.

Authors:  N Luz; E Beck
Journal:  J Virol       Date:  1991-12       Impact factor: 5.103

2.  Internal initiation of translation mediated by the 5' leader of a cellular mRNA.

Authors:  D G Macejak; P Sarnow
Journal:  Nature       Date:  1991-09-05       Impact factor: 49.962

3.  Conservation of the secondary structure elements of the 5'-untranslated region of cardio- and aphthovirus RNAs.

Authors:  E V Pilipenko; V M Blinov; B K Chernov; T M Dmitrieva; V I Agol
Journal:  Nucleic Acids Res       Date:  1989-07-25       Impact factor: 16.971

4.  A segment of the 5' nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation.

Authors:  S K Jang; H G Kräusslich; M J Nicklin; G M Duke; A C Palmenberg; E Wimmer
Journal:  J Virol       Date:  1988-08       Impact factor: 5.103

5.  An RNA sequence of hundreds of nucleotides at the 5' end of poliovirus RNA is involved in allowing viral protein synthesis.

Authors:  D Trono; R Andino; D Baltimore
Journal:  J Virol       Date:  1988-07       Impact factor: 5.103

6.  Poliovirus proteinase 2A induces cleavage of eucaryotic initiation factor 4F polypeptide p220.

Authors:  H G Kräusslich; M J Nicklin; H Toyoda; D Etchison; E Wimmer
Journal:  J Virol       Date:  1987-09       Impact factor: 5.103

7.  Leader protein of foot-and-mouth disease virus is required for cleavage of the p220 component of the cap-binding protein complex.

Authors:  M A Devaney; V N Vakharia; R E Lloyd; E Ehrenfeld; M J Grubman
Journal:  J Virol       Date:  1988-11       Impact factor: 5.103

8.  Cap-independent translation of poliovirus mRNA is conferred by sequence elements within the 5' noncoding region.

Authors:  J Pelletier; G Kaplan; V R Racaniello; N Sonenberg
Journal:  Mol Cell Biol       Date:  1988-03       Impact factor: 4.272

9.  Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA.

Authors:  J Pelletier; N Sonenberg
Journal:  Nature       Date:  1988-07-28       Impact factor: 49.962

Review 10.  The scanning model for translation: an update.

Authors:  M Kozak
Journal:  J Cell Biol       Date:  1989-02       Impact factor: 10.539

View more
  92 in total

1.  Two independent mechanisms promote expression of an N-terminal truncated USP18 isoform with higher DeISGylation activity in the nucleus.

Authors:  Christoph Burkart; Jun-Bao Fan; Dong-Er Zhang
Journal:  J Biol Chem       Date:  2011-12-14       Impact factor: 5.157

Review 2.  One core, two shells: bacterial and eukaryotic ribosomes.

Authors:  Sergey Melnikov; Adam Ben-Shem; Nicolas Garreau de Loubresse; Lasse Jenner; Gulnara Yusupova; Marat Yusupov
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

3.  Poliovirus unlinks TIA1 aggregation and mRNA stress granule formation.

Authors:  James P White; Richard E Lloyd
Journal:  J Virol       Date:  2011-09-28       Impact factor: 5.103

Review 4.  Translation initiation of the HIV-1 mRNA.

Authors:  Théophile Ohlmann; Chloé Mengardi; Marcelo López-Lastra
Journal:  Translation (Austin)       Date:  2014-10-31

5.  The 5' UTR of HIV-1 full-length mRNA and the Tat viral protein modulate the programmed -1 ribosomal frameshift that generates HIV-1 enzymes.

Authors:  Johanie Charbonneau; Karine Gendron; Gerardo Ferbeyre; Léa Brakier-Gingras
Journal:  RNA       Date:  2012-01-27       Impact factor: 4.942

6.  Poly(A)-binding protein facilitates translation of an uncapped/nonpolyadenylated viral RNA by binding to the 3' untranslated region.

Authors:  Hiro-Oki Iwakawa; Yuri Tajima; Takako Taniguchi; Masanori Kaido; Kazuyuki Mise; Yukihide Tomari; Hisaaki Taniguchi; Tetsuro Okuno
Journal:  J Virol       Date:  2012-05-16       Impact factor: 5.103

Review 7.  Cell-free protein synthesis: applications come of age.

Authors:  Erik D Carlson; Rui Gan; C Eric Hodgman; Michael C Jewett
Journal:  Biotechnol Adv       Date:  2011-10-08       Impact factor: 14.227

Review 8.  uORF-mediated translational control: recently elucidated mechanisms and implications in cancer.

Authors:  Hung-Hsi Chen; Woan-Yuh Tarn
Journal:  RNA Biol       Date:  2019-06-24       Impact factor: 4.652

9.  Stress Granules and Virus Replication.

Authors:  Cathy L Miller
Journal:  Future Virol       Date:  2011       Impact factor: 1.831

10.  Structural domains within the HIV-1 mRNA and the ribosomal protein S25 influence cap-independent translation initiation.

Authors:  Felipe Carvajal; Maricarmen Vallejos; Beth Walters; Nataly Contreras; Marla I Hertz; Eduardo Olivares; Carlos J Cáceres; Karla Pino; Alejandro Letelier; Sunnie R Thompson; Marcelo López-Lastra
Journal:  FEBS J       Date:  2016-06-10       Impact factor: 5.542

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.