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Literature DB >> 2548167

Conservation of the secondary structure elements of the 5'-untranslated region of cardio- and aphthovirus RNAs.

E V Pilipenko¹, V M Blinov, B K Chernov, T M Dmitrieva, V I Agol.

Abstract

An analysis of published nucleotide sequences of the 5'-untranslated region (5'-UTR) of 7 cardioviruses and 3 aphthoviruses has allowed us to derive a consensus secondary structure model that differs from that previously proposed for the 5'-UTR of entero- and rhinoviruses, though all these viruses belong to the same family, Picornaviridae. The theoretical model derived here was experimentally supported by investigating the accessibility of encephalomyocarditis virus RNA to modifications with dimethyl sulfate and its susceptibility to S1 and cobra venom nucleases. The possible involvement of the 5"-UTR secondary structure domains in the translational control is briefly discussed.

Entities: Chemical Species

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Year: 1989 PMID： 2548167 PMCID： PMC318190 DOI： 10.1093/nar/17.14.5701

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

23 in total

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Journal: J Virol Date: 1988-08 Impact factor: 5.103

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Journal: J Virol Date: 1988-07 Impact factor: 5.103

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Journal: Virology Date: 1988-07 Impact factor: 3.616

7. An internal 5'-noncoding region required for translation of poliovirus RNA in vitro.

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Authors: J Pelletier; G Kaplan; V R Racaniello; N Sonenberg
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9. Cap-independent translation of poliovirus mRNA is conferred by sequence elements within the 5' noncoding region.

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Journal: Mol Cell Biol Date: 1988-03 Impact factor: 4.272

10. Insights into Theiler's virus neurovirulence based on a genomic comparison of the neurovirulent GDVII and less virulent BeAn strains.

Authors: D C Pevear; J Borkowski; M Calenoff; C K Oh; B Ostrowski; H L Lipton
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99 in total

1. Distinct attenuation phenotypes caused by mutations in the translational starting window of Theiler's murine encephalomyelitis virus.

Authors: E V Pilipenko; E G Viktorova; E V Khitrina; S V Maslova; N Jarousse; M Brahic; V I Agol
Journal: J Virol Date: 1999-04 Impact factor: 5.103

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Journal: RNA Date: 2000-07 Impact factor: 4.942

3. Cell-specific proteins regulate viral RNA translation and virus-induced disease.

Authors: E V Pilipenko; E G Viktorova; S T Guest; V I Agol; R P Roos
Journal: EMBO J Date: 2001-12-03 Impact factor: 11.598

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Authors: C Witwer; S Rauscher; I L Hofacker; P F Stadler
Journal: Nucleic Acids Res Date: 2001-12-15 Impact factor: 16.971

5. A cell cycle-dependent protein serves as a template-specific translation initiation factor.

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Journal: Genes Dev Date: 2000-08-15 Impact factor: 11.361

6. Internal ribosomal entry site-mediated translation initiation in equine rhinitis A virus: similarities to and differences from that of foot-and-mouth disease virus.

Authors: T M Hinton; F Li; B S Crabb
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7. Cap-independent translation by the 5' untranslated region of Theiler's murine encephalomyelitis virus.

Authors: P K Bandyopadhyay; C Wang; H L Lipton
Journal: J Virol Date: 1992-11 Impact factor: 5.103

8. Towards identification of cis-acting elements involved in the replication of enterovirus and rhinovirus RNAs: a proposal for the existence of tRNA-like terminal structures.

Authors: E V Pilipenko; S V Maslova; A N Sinyakov; V I Agol
Journal: Nucleic Acids Res Date: 1992-04-11 Impact factor: 16.971

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Authors: J R Gebhard; E Ehrenfeld
Journal: J Virol Date: 1992-05 Impact factor: 5.103

10. Cell proteins bind to a linear polypyrimidine-rich sequence within the 5'-untranslated region of rhinovirus 14 RNA.

Authors: I A Rojas-Eisenring; M Cajero-Juarez; R M del Angel
Journal: J Virol Date: 1995-11 Impact factor: 5.103