Literature DB >> 19587237

Zinc chlorins for artificial light-harvesting self-assemble into antiparallel stacks forming a microcrystalline solid-state material.

Swapna Ganapathy1, Sanchita Sengupta, Piotr K Wawrzyniak, Valerie Huber, Francesco Buda, Ute Baumeister, Frank Würthner, Huub J M de Groot.   

Abstract

We introduce a concept to solve the structure of a microcrystalline material in the solid-state at natural abundance without access to distance constraints, using magic angle spinning (MAS) NMR spectroscopy in conjunction with X-ray powder diffraction and DFT calculations. The method is applied to a novel class of materials that form (semi)conductive 1D wires for supramolecular electronics and artificial light-harvesting. The zinc chlorins 3-devinyl-3(1)-hydroxymethyl-13(2)-demethoxycarbonylpheophorbide a (3',5'-bis-dodecyloxy)benzyl ester zinc complex 1 and 3-devinyl-3(1)-methoxymethyl-13(2)-demethoxycarbonylpheophorbide a (3',5'-bis-dodecyloxy)benzyl ester zinc complex 2, self-assemble into extended excitonically coupled chromophore stacks. (1)H-(13)C heteronuclear dipolar correlation MAS NMR experiments provided the (1)H resonance assignment of the chlorin rings that allowed accurate probing of ring currents related to the stacking of macrocycles. DFT ring-current shift calculations revealed that both chlorins self-assemble in antiparallel pi-stacks in planar layers in the solid-state. Concomitantly, X-ray powder diffraction measurements for chlorin 2 at 80 degrees C revealed a 3D lattice for the mesoscale packing that matches molecular mechanics optimized aggregate models. For chlorin 2 the stacks alternate with a periodicity of 0.68 nm and a 3D unit cell with an approximate volume of 6.28 nm(3) containing 4 molecules, which is consistent with space group P2(1)22(1).

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Year:  2009        PMID: 19587237      PMCID: PMC2707269          DOI: 10.1073/pnas.0811872106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Exciton theory for supramolecular chlorosomal aggregates: 1. Aggregate size dependence of the linear spectra.

Authors:  V I Prokhorenko; D B Steensgaard; A R Holzwarth
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

2.  Determination of the topography and biometry of chlorosomes by atomic force microscopy.

Authors:  Asunción Martinez-Planells; Juan B Arellano; Carles M Borrego; Carmen López-Iglesias; Frederic Gich; Jesús Garcia-Gil
Journal:  Photosynth Res       Date:  2002       Impact factor: 3.573

3.  Nucleus-independent chemical shifts (NICS) as an aromaticity criterion.

Authors:  Zhongfang Chen; Chaitanya S Wannere; Clémence Corminboeuf; Ralph Puchta; Paul von Ragué Schleyer
Journal:  Chem Rev       Date:  2005-10       Impact factor: 60.622

4.  A refined model of the chlorosomal antennae of the green bacterium Chlorobium tepidum from proton chemical shift constraints obtained with high-field 2-D and 3-D MAS NMR dipolar correlation spectroscopy.

Authors:  B J van Rossum; D B Steensgaard; F M Mulder; G J Boender; K Schaffner; A R Holzwarth; H J deGroot
Journal:  Biochemistry       Date:  2001-02-13       Impact factor: 3.162

5.  Direct counting of submicrometer-sized photosynthetic apparatus dispersed in medium at cryogenic temperature by confocal laser fluorescence microscopy: estimation of the number of bacteriochlorophyll c in single light-harvesting antenna complexes chlorosomes of green photosynthetic bacteria.

Authors:  Yoshitaka Saga; Yutaka Shibata; Shigeru Itoh; Hitoshi Tamiaki
Journal:  J Phys Chem B       Date:  2007-10-05       Impact factor: 2.991

6.  The supramolecular organization of self-assembling chlorosomal bacteriochlorophyll c, d, or e mimics.

Authors:  Tobias Jochum; Chilla Malla Reddy; Andreas Eichhöfer; Gernot Buth; Jedrzej Szmytkowski; Heinz Kalt; David Moss; Teodor Silviu Balaban
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-28       Impact factor: 11.205

7.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

8.  Antenna organization in green photosynthetic bacteria. 2. Excitation transfer in detached and membrane-bound chlorosomes from Chloroflexus aurantiacus.

Authors:  D C Brune; G H King; A Infosino; T Steiner; M L Thewalt; R E Blankenship
Journal:  Biochemistry       Date:  1987-12-29       Impact factor: 3.162

9.  CP-MAS 13C-NMR dipolar correlation spectroscopy of 13C-enriched chlorosomes and isolated bacteriochlorophyll c aggregates of Chlorobium tepidum: the self-organization of pigments is the main structural feature of chlorosomes.

Authors:  T S Balaban; A R Holzwarth; K Schaffner; G J Boender; H J de Groot
Journal:  Biochemistry       Date:  1995-11-21       Impact factor: 3.162

10.  Structure-property relationships for self-assembled zinc chlorin light-harvesting dye aggregates.

Authors:  Valerie Huber; Sanchita Sengupta; Frank Würthner
Journal:  Chemistry       Date:  2008       Impact factor: 5.236

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  9 in total

1.  Spectroscopic investigations on the H-type aggregation of coumarin 153 dye molecules: role of Au nanoparticles and γ-cyclodextrin.

Authors:  Tapasi Sen; Santanu Bhattacharyya; Sadananda Mandal; Amitava Patra
Journal:  J Fluoresc       Date:  2011-09-10       Impact factor: 2.217

2.  Introduction to theory/modeling methods in photosynthesis.

Authors:  Francesco Buda
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

Review 3.  Solid-state NMR applied to photosynthetic light-harvesting complexes.

Authors:  Anjali Pandit; Huub J M de Groot
Journal:  Photosynth Res       Date:  2011-08-13       Impact factor: 3.573

Review 4.  Biosolar cells: global artificial photosynthesis needs responsive matrices with quantum coherent kinetic control for high yield.

Authors:  R L Purchase; H J M de Groot
Journal:  Interface Focus       Date:  2015-06-06       Impact factor: 3.906

5.  Determination of Controlled Self-Assembly of a Paracrystalline Material by Homology Modelling with Hybrid NMR and TEM.

Authors:  Brijith Thomas; Jeroen Rombouts; Karthick Babu Sai Sankar Gupta; Romano V A Orru; Koop Lammertsma; Huub J M de Groot
Journal:  Chemistry       Date:  2017-06-26       Impact factor: 5.236

Review 6.  The Assembly of Porphyrin Systems in Well-Defined Nanostructures: An Update.

Authors:  Gabriele Magna; Donato Monti; Corrado Di Natale; Roberto Paolesse; Manuela Stefanelli
Journal:  Molecules       Date:  2019-11-26       Impact factor: 4.411

7.  Quantum Chemical Simulation of the Qy Absorption Spectrum of Zn Chlorin Aggregates for Artificial Photosynthesis.

Authors:  Zhimo Wang; Bingbing Suo; Shiwei Yin; Wenli Zou
Journal:  Molecules       Date:  2021-02-19       Impact factor: 4.411

8.  Trefoil factor family 2 expression inhibits gastric cancer cell growth and invasion in vitro via interactions with the transcription factor Sp3.

Authors:  Yiling Cai; Mengting Yi; Dajun Chen; Jingjing Liu; Bayasi Guleng; Jianlin Ren; Huaxiu Shi
Journal:  Int J Mol Med       Date:  2016-09-19       Impact factor: 4.101

9.  Contrasting Modes of Self-Assembly and Hydrogen-Bonding Heterogeneity in Chlorosomes of Chlorobaculum tepidum.

Authors:  Xinmeng Li; Francesco Buda; Huub J M de Groot; G J Agur Sevink
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2018-05-30       Impact factor: 4.126

  9 in total

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