Literature DB >> 14581217

Exciton theory for supramolecular chlorosomal aggregates: 1. Aggregate size dependence of the linear spectra.

V I Prokhorenko1, D B Steensgaard, A R Holzwarth.   

Abstract

The interior of chlorosomes of green bacteria forms an unusual antenna system organized without proteins. The steady-spectra (absorption, circular dichroism, and linear dichroism) have been modeled using the Frenkel Hamiltonian for the large tubular aggregates of bacteriochlorophylls with geometries corresponding to those proposed for Chloroflexus aurantiacus and Chlorobium tepidum chlorosomes. For the Cf. aurantiacus aggregates we apply a structure used previously (V. I. Prokhorenko., D. B. Steensgaard, and A. R. Holzwarth, Biophys: J. 2000, 79:2105-2120), whereas for the Cb. tepidum aggregates a new extended model of double-tube aggregates, based on recently published solid-state nuclear magnetic resonance studies (B.-J. van Rossum, B. Y. van Duhl, D. B. Steensgaard, T. S. Balaban, A. R. Holzwarth, K. Schaffner, and H. J. M. de Groot, Biochemistry 2001, 40:1587-1595), is developed. We find that the circular dichroism spectra depend strongly on the aggregate length for both types of chlorosomes. Their shape changes from "type-II" (negative at short wavelengths to positive at long wavelengths) to the "mixed-type" (negative-positive-negative) in the nomenclature proposed in K. Griebenow, A. R. Holzwarth, F. van Mourik, and R. van Grondelle, Biochim: Biophys. Acta 1991, 1058:194-202, for an aggregate length of 30-40 bacteriochlorophyll molecules per stack. This "size effect" on the circular dichroism spectra is caused by appearance of macroscopic chirality due to circular distribution of the transition dipole moment of the monomers. We visualize these distributions, and also the corresponding Frenkel excitons, using a novel presentation technique. The observed size effects provide a key to explain many previously puzzling and seemingly contradictory experimental data in the literature on the circular and linear dichroism spectra of seemingly identical types of chlorosomes.

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Year:  2003        PMID: 14581217      PMCID: PMC1303593          DOI: 10.1016/S0006-3495(03)74735-3

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  19 in total

1.  Exciton dynamics in the chlorosomal antennae of the green bacteria Chloroflexus aurantiacus and Chlorobium tepidum.

Authors:  V I Prokhorenko; D B Steensgaard; A R Holzwarth
Journal:  Biophys J       Date:  2000-10       Impact factor: 4.033

2.  Excitation energy transfer dynamics and excited-state structure in chlorosomes of Chlorobium phaeobacteroides.

Authors:  Jakub Psencík; Ying-Zhong Ma; Juan B Arellano; Jan Hála; Tomas Gillbro
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

3.  Giant circular dichroism of chlorosomes fromChloroflexus aurantiacus treated with 1-hexanol and proteolytic enzymes.

Authors:  R P Lehmann; R A Brunisholz; H Zuber
Journal:  Photosynth Res       Date:  1994-07       Impact factor: 3.573

4.  Spectral broadening of interacting pigments: polarized absorption by photosynthetic proteins.

Authors:  O J Somsen; R van Grondelle; H van Amerongen
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

5.  A comparative study of the optical characteristics of intact cells of photosynthetic green sulfur bacteria containing bacteriochlorophyll c, d or e.

Authors:  S C Otte; J C van der Heiden; N Pfennig; J Amesz
Journal:  Photosynth Res       Date:  1991-05       Impact factor: 3.573

6.  [Analysis of the linear dichroism of reaction centers oriented in polyacrylamide gel].

Authors:  A O Ganago; M V Fok; I A Abdurakhmanov; A A Solov'ev; Iu E Erokhin
Journal:  Mol Biol (Mosk)       Date:  1980 Mar-Apr

Review 7.  Chlorophyll organization in green photosynthetic bacteria.

Authors:  J M Olson
Journal:  Biochim Biophys Acta       Date:  1980-12-22

8.  The functional role of protein in the organization of bacteriochlorophyll c in chlorosomes of Chloroflexus aurantiacus.

Authors:  G Niedermeier; H Scheer; R G Feick
Journal:  Eur J Biochem       Date:  1992-03-01

9.  CP-MAS 13C-NMR dipolar correlation spectroscopy of 13C-enriched chlorosomes and isolated bacteriochlorophyll c aggregates of Chlorobium tepidum: the self-organization of pigments is the main structural feature of chlorosomes.

Authors:  T S Balaban; A R Holzwarth; K Schaffner; G J Boender; H J de Groot
Journal:  Biochemistry       Date:  1995-11-21       Impact factor: 3.162

10.  Self quenching of chlorosome chlorophylls in water and hexanol-saturated water.

Authors:  Y Zhu; S Lin; B L Ramakrishna; P I van Noort; R E Blankenship
Journal:  Photosynth Res       Date:  1996-03       Impact factor: 3.573

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  25 in total

1.  Structure of the light-harvesting bacteriochlorophyll c assembly in chlorosomes from Chlorobium limicola determined by solid-state NMR.

Authors:  Ayako Egawa; Toshimichi Fujiwara; Tadashi Mizoguchi; Yoshinori Kakitani; Yasushi Koyama; Hideo Akutsu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-10       Impact factor: 11.205

2.  Low-temperature fluorescence from single chlorosomes, photosynthetic antenna complexes of green filamentous and sulfur bacteria.

Authors:  Yutaka Shibata; Yoshitaka Saga; Hitoshi Tamiaki; Shigeru Itoh
Journal:  Biophys J       Date:  2006-09-01       Impact factor: 4.033

Review 3.  Natural photosystems from an engineer's perspective: length, time, and energy scales of charge and energy transfer.

Authors:  Dror Noy
Journal:  Photosynth Res       Date:  2007-10-30       Impact factor: 3.573

4.  Alternating syn-anti bacteriochlorophylls form concentric helical nanotubes in chlorosomes.

Authors:  Swapna Ganapathy; Gert T Oostergetel; Piotr K Wawrzyniak; Michael Reus; Aline Gomez Maqueo Chew; Francesco Buda; Egbert J Boekema; Donald A Bryant; Alfred R Holzwarth; Huub J M de Groot
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-12       Impact factor: 11.205

Review 5.  Chlorosome antenna complexes from green photosynthetic bacteria.

Authors:  Gregory S Orf; Robert E Blankenship
Journal:  Photosynth Res       Date:  2013-06-13       Impact factor: 3.573

6.  Zinc chlorins for artificial light-harvesting self-assemble into antiparallel stacks forming a microcrystalline solid-state material.

Authors:  Swapna Ganapathy; Sanchita Sengupta; Piotr K Wawrzyniak; Valerie Huber; Francesco Buda; Ute Baumeister; Frank Würthner; Huub J M de Groot
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-08       Impact factor: 11.205

7.  Investigation on chlorosomal antenna geometries: tube, lamella and spiral-type self-aggregates.

Authors:  Juha M Linnanto; Jouko E I Korppi-Tommola
Journal:  Photosynth Res       Date:  2008-04-29       Impact factor: 3.573

8.  Temperature shift effect on the Chlorobaculum tepidum chlorosomes.

Authors:  Joseph Kuo-Hsiang Tang; Ying Xu; Guillermo M Muhlmann; Farrokh Zare; Yadana Khin; Sun W Tam
Journal:  Photosynth Res       Date:  2013-02-23       Impact factor: 3.573

9.  The effects of light-induced reduction of the photosystem II reaction center.

Authors:  Peter Palencar; Tatyana Prudnikova; Frantisek Vacha; Michal Kuty
Journal:  J Mol Model       Date:  2009-01-27       Impact factor: 1.810

10.  Temperature and carbon assimilation regulate the chlorosome biogenesis in green sulfur bacteria.

Authors:  Joseph Kuo-Hsiang Tang; Semion K Saikin; Sai Venkatesh Pingali; Miriam M Enriquez; Joonsuk Huh; Harry A Frank; Volker S Urban; Alán Aspuru-Guzik
Journal:  Biophys J       Date:  2013-09-17       Impact factor: 4.033

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