Literature DB >> 11327817

A refined model of the chlorosomal antennae of the green bacterium Chlorobium tepidum from proton chemical shift constraints obtained with high-field 2-D and 3-D MAS NMR dipolar correlation spectroscopy.

B J van Rossum1, D B Steensgaard, F M Mulder, G J Boender, K Schaffner, A R Holzwarth, H J deGroot.   

Abstract

Heteronuclear 2-D and 3-D magic-angle spinning NMR dipolar correlation spectroscopy was applied to determine solid-state (1)H shifts for aggregated bacteriochlorophyll c (BChl c) in uniformly (13)C-enriched light harvesting chlorosomes of the green photosynthetic bacterium Chlorobium tepidum. A complete assignment of 29 different observable resonances of the 61 protons of the aggregated BChl c in the intact chlorosomes is obtained. Aggregation shifts relative to monomeric BChl c in solution are detected for protons attached to rings I, II, and III/V and to their side chains. The 2(1)-H(3), 3(2)-H(3), and 3(1)-H resonances are shifted upfield by -2.2, -1, and -3.3 ppm, respectively, relative to monomeric BChl c in solution. Although the resonances are inhomogeneously broadened and reveal considerable global structural heterogeneity, the 5-CH and the 7-Me responses are doubled, which provides evidence for the existence of at least two relatively well-defined structurally different arrangements. Ab initio quantum chemical modeling studies were performed to refine a model for the self-assembled BChl c with two different types of BChl stacks. The BChl in the stacks can adopt either anti- or syn-configuration of the coordinative bond, where anti and syn designate the relative orientation of the Mg-OH bond relative to the direction of the 17-17(1) bond. The analogy between aggregation shifts for BChl c in the chlorosome and for self-assembled chlorophyll a/H(2)O is explored, and a bilayer model for the tubular supra-structure of sheets of BChl c is proposed, from a homology modeling approach.

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Year:  2001        PMID: 11327817     DOI: 10.1021/bi0017529

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  22 in total

1.  The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.

Authors:  Jonathan A Eisen; Karen E Nelson; Ian T Paulsen; John F Heidelberg; Martin Wu; Robert J Dodson; Robert Deboy; Michelle L Gwinn; William C Nelson; Daniel H Haft; Erin K Hickey; Jeremy D Peterson; A Scott Durkin; James L Kolonay; Fan Yang; Ingeborg Holt; Lowell A Umayam; Tanya Mason; Michael Brenner; Terrance P Shea; Debbie Parksey; William C Nierman; Tamara V Feldblyum; Cheryl L Hansen; M Brook Craven; Diana Radune; Jessica Vamathevan; Hoda Khouri; Owen White; Tanja M Gruber; Karen A Ketchum; J Craig Venter; Hervé Tettelin; Donald A Bryant; Claire M Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-01       Impact factor: 11.205

2.  Excitation energy transfer dynamics and excited-state structure in chlorosomes of Chlorobium phaeobacteroides.

Authors:  Jakub Psencík; Ying-Zhong Ma; Juan B Arellano; Jan Hála; Tomas Gillbro
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

3.  Exciton theory for supramolecular chlorosomal aggregates: 1. Aggregate size dependence of the linear spectra.

Authors:  V I Prokhorenko; D B Steensgaard; A R Holzwarth
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

4.  Lamellar organization of pigments in chlorosomes, the light harvesting complexes of green photosynthetic bacteria.

Authors:  J Psencík; T P Ikonen; P Laurinmäki; M C Merckel; S J Butcher; R E Serimaa; R Tuma
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

5.  Exciton dynamics in the chlorosomal antenna of the green bacterium Chloroflexus aurantiacus: experimental and theoretical studies of femtosecond pump-probe spectra.

Authors:  Andrey Yakovlev; Vladimir Novoderezhkin; Alexandra Taisova; Zoya Fetisova
Journal:  Photosynth Res       Date:  2002       Impact factor: 3.573

6.  Structure of the light-harvesting bacteriochlorophyll c assembly in chlorosomes from Chlorobium limicola determined by solid-state NMR.

Authors:  Ayako Egawa; Toshimichi Fujiwara; Tadashi Mizoguchi; Yoshinori Kakitani; Yasushi Koyama; Hideo Akutsu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-10       Impact factor: 11.205

7.  Low-temperature fluorescence from single chlorosomes, photosynthetic antenna complexes of green filamentous and sulfur bacteria.

Authors:  Yutaka Shibata; Yoshitaka Saga; Hitoshi Tamiaki; Shigeru Itoh
Journal:  Biophys J       Date:  2006-09-01       Impact factor: 4.033

8.  Alternating syn-anti bacteriochlorophylls form concentric helical nanotubes in chlorosomes.

Authors:  Swapna Ganapathy; Gert T Oostergetel; Piotr K Wawrzyniak; Michael Reus; Aline Gomez Maqueo Chew; Francesco Buda; Egbert J Boekema; Donald A Bryant; Alfred R Holzwarth; Huub J M de Groot
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-12       Impact factor: 11.205

9.  Atomic structure of the bacteriochlorophyll c assembly in intact chlorosomes from Chlorobium limicola determined by solid-state NMR.

Authors:  Hideo Akutsu; Ayako Egawa; Toshimichi Fujiwara
Journal:  Photosynth Res       Date:  2010-01-09       Impact factor: 3.573

10.  Zinc chlorins for artificial light-harvesting self-assemble into antiparallel stacks forming a microcrystalline solid-state material.

Authors:  Swapna Ganapathy; Sanchita Sengupta; Piotr K Wawrzyniak; Valerie Huber; Francesco Buda; Ute Baumeister; Frank Würthner; Huub J M de Groot
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-08       Impact factor: 11.205

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