Literature DB >> 19562109

Synthetic biology: exploring and exploiting genetic modularity through the design of novel biological networks.

Christina M Agapakis1, Pamela A Silver.   

Abstract

Synthetic biology has been used to describe many biological endeavors over the past thirty years--from designing enzymes and in vitro systems, to manipulating existing metabolisms and gene expression, to creating entirely synthetic replicating life forms. What separates the current incarnation of synthetic biology from the recombinant DNA technology or metabolic engineering of the past is an emphasis on principles from engineering such as modularity, standardization, and rigorously predictive models. As such, synthetic biology represents a new paradigm for learning about and using biological molecules and data, with applications in basic science, biotechnology, and medicine. This review covers the canonical examples as well as some recent advances in synthetic biology in terms of what we know and what we can learn about the networks underlying biology, and how this endeavor may shape our understanding of living systems.

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Year:  2009        PMID: 19562109     DOI: 10.1039/b901484e

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  16 in total

1.  A biosynthetic strategy for re-engineering the Staphylococcus aureus cell wall with non-native small molecules.

Authors:  James W Nelson; Alexander G Chamessian; Patrick J McEnaney; Ryan P Murelli; Barbara I Kazmierczak; Barbara I Kazmiercak; David A Spiegel
Journal:  ACS Chem Biol       Date:  2010-10-05       Impact factor: 5.100

Review 2.  Engineering of a genome-reduced host: practical application of synthetic biology in the overproduction of desired secondary metabolites.

Authors:  Hong Gao; Ying Zhuo; Elizabeth Ashforth; Lixin Zhang
Journal:  Protein Cell       Date:  2010-07-29       Impact factor: 14.870

Review 3.  Biotechnological domestication of pseudomonads using synthetic biology.

Authors:  Pablo I Nikel; Esteban Martínez-García; Víctor de Lorenzo
Journal:  Nat Rev Microbiol       Date:  2014-05       Impact factor: 60.633

Review 4.  Parts plus pipes: synthetic biology approaches to metabolic engineering.

Authors:  Patrick M Boyle; Pamela A Silver
Journal:  Metab Eng       Date:  2011-10-25       Impact factor: 9.783

5.  Towards a whole-cell modeling approach for synthetic biology.

Authors:  Oliver Purcell; Bonny Jain; Jonathan R Karr; Markus W Covert; Timothy K Lu
Journal:  Chaos       Date:  2013-06       Impact factor: 3.642

Review 6.  Light-controlled synthetic gene circuits.

Authors:  Laura Gardner; Alexander Deiters
Journal:  Curr Opin Chem Biol       Date:  2012-05-25       Impact factor: 8.822

7.  A synthetic circuit for selectively arresting daughter cells to create aging populations.

Authors:  Bruno Afonso; Pamela A Silver; Caroline M Ajo-Franklin
Journal:  Nucleic Acids Res       Date:  2010-02-11       Impact factor: 16.971

8.  Recent progress in synthetic biology for microbial production of C3-C10 alcohols.

Authors:  Edna N Lamsen; Shota Atsumi
Journal:  Front Microbiol       Date:  2012-06-08       Impact factor: 5.640

9.  Tuning response curves for synthetic biology.

Authors:  Jordan Ang; Edouard Harris; Brendan J Hussey; Richard Kil; David R McMillen
Journal:  ACS Synth Biol       Date:  2013-09-03       Impact factor: 5.110

10.  Synthetic approaches to study transcriptional networks and noise in mammalian systems.

Authors:  Paula Gregorio-Godoy; David G Míguez
Journal:  IET Syst Biol       Date:  2013-02       Impact factor: 1.615

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