Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Efficient replication bypass of size-expanded DNA base pairs in bacterial cells.

Literature DB >> 19444841

Efficient replication bypass of size-expanded DNA base pairs in bacterial cells.

James C Delaney¹, Jianmin Gao, Haibo Liu, Nidhi Shrivastav, John M Essigmann, Eric T Kool.

Abstract

Supersize me! Size-expanded DNA bases (xDNA) are able to encode natural DNA sequences in replication. In vitro experiments with a DNA polymerase show nucleotide incorporation opposite the xDNA bases with correct pairing. In vivo experiments using E. coli show that two xDNA bases (xA and xC, see picture) encode the correct replication partners.

Entities: CellLine Chemical Disease Species

Mesh：

Substances：

Year: 2009 PMID： 19444841 PMCID： PMC3434874 DOI： 10.1002/anie.200805683

Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN： 1433-7851 Impact factor: 15.336

46 in total

1. Chemical etiology of nucleic acid structure: the alpha-threofuranosyl-(3'-->2') oligonucleotide system.

Authors: K Schöning; P Scholz; S Guntha; X Wu; R Krishnamurthy; A Eschenmoser
Journal: Science Date: 2000-11-17 Impact factor: 47.728

2. Probing the active site tightness of DNA polymerase in subangstrom increments.

Authors: Tae Woo Kim; James C Delaney; John M Essigmann; Eric T Kool
Journal: Proc Natl Acad Sci U S A Date: 2005-10-25 Impact factor: 11.205

3. Functional evidence for a small and rigid active site in a high fidelity DNA polymerase: probing T7 DNA polymerase with variably sized base pairs.

Authors: Tae Woo Kim; Luis G Brieba; Tom Ellenberger; Eric T Kool
Journal: J Biol Chem Date: 2005-11-27 Impact factor: 5.157

4. Crystal structure of homo-DNA and nature's choice of pentose over hexose in the genetic system.

Authors: Martin Egli; Pradeep S Pallan; Rekha Pattanayek; Christopher J Wilds; Paolo Lubini; George Minasov; Max Dobler; Christian J Leumann; Albert Eschenmoser
Journal: J Am Chem Soc Date: 2006-08-23 Impact factor: 15.419

Review 5. Proficient and accurate bypass of persistent DNA lesions by DinB DNA polymerases.

Authors: Daniel F Jarosz; Veronica G Godoy; Graham C Walker
Journal: Cell Cycle Date: 2007-04-23 Impact factor: 4.534

6. Context-dependent mutagenesis by DNA lesions.

Authors: J C Delaney; J M Essigmann
Journal: Chem Biol Date: 1999-10

7. Stacking and stability of RNA duplexes containing fluorobenzene and fluorobenzimidazole nucleosides.

Authors: J Parsch; J W Engels
Journal: Nucleosides Nucleotides Nucleic Acids Date: 2001 Apr-Jul Impact factor: 1.381

8. TNA synthesis by DNA polymerases.

Authors: John C Chaput; Jack W Szostak
Journal: J Am Chem Soc Date: 2003-08-06 Impact factor: 15.419

9. Unnatural substrate repertoire of A, B, and X family DNA polymerases.

Authors: Gil Tae Hwang; Floyd E Romesberg
Journal: J Am Chem Soc Date: 2008-10-11 Impact factor: 15.419

10. Reading, writing, and modulating genetic information with boranophosphate mimics of nucleotides, DNA, and RNA.

Authors: Barbara Ramsay Shaw; Mikhail Dobrikov; Xin Wang; Jing Wan; Kaizhang He; Jin-Lai Lin; Ping Li; Vladimir Rait; Zinaida A Sergueeva; Dmitri Sergueev
Journal: Ann N Y Acad Sci Date: 2003-12 Impact factor: 5.691

13 in total

Review 1. Non-natural nucleic acids for synthetic biology.

Authors: Daniel H Appella
Journal: Curr Opin Chem Biol Date: 2009-10-29 Impact factor: 8.822

Review 2. DNA-multichromophore systems.

Authors: Yin Nah Teo; Eric T Kool
Journal: Chem Rev Date: 2012-03-16 Impact factor: 60.622

3. Encoding phenotype in bacteria with an alternative genetic set.

Authors: Andrew T Krueger; Larryn W Peterson; Jijumon Chelliserry; Daniel J Kleinbaum; Eric T Kool
Journal: J Am Chem Soc Date: 2011-10-21 Impact factor: 15.419

Review 4. Chemistry of nucleic acids: impacts in multiple fields.

Authors: Omid Khakshoor; Eric T Kool
Journal: Chem Commun (Camb) Date: 2011-04-11 Impact factor: 6.222

5. Artificial Base zT as Functional "Element" for Constructing Photoresponsive DNA Nanomolecules.

Authors: Ruowen Wang; Cheng Jin; Xiaoyan Zhu; Liyi Zhou; Wenjing Xuan; Yuan Liu; Qiaoling Liu; Weihong Tan
Journal: J Am Chem Soc Date: 2017-06-29 Impact factor: 15.419

6. Artificial Sandwich Base for Monitoring Single-Nucleobase Changes and Charge-Transfer Rates in DNA.

Authors: Razack Abdullah; Sitao Xie; Ruowen Wang; Cheng Jin; Yulin Du; Ting Fu; Juan Li; Jie Tan; Lili Zhang; Weihong Tan
Journal: Anal Chem Date: 2019-01-08 Impact factor: 6.986

7. Toward a designed genetic system with biochemical function: polymerase synthesis of single and multiple size-expanded DNA base pairs.

Authors: Haige Lu; Andrew T Krueger; Jianmin Gao; Haibo Liu; Eric T Kool
Journal: Org Biomol Chem Date: 2010-04-21 Impact factor: 3.876