Literature DB >> 28585836

Artificial Base zT as Functional "Element" for Constructing Photoresponsive DNA Nanomolecules.

Ruowen Wang1,2, Cheng Jin1, Xiaoyan Zhu1, Liyi Zhou1, Wenjing Xuan1, Yuan Liu1,2, Qiaoling Liu1, Weihong Tan1,2.   

Abstract

In contrast to small molecules, DNA and RNA macromolecules can be accurately formulated with base "elements" abbreviated as A, T, U, C, and G. However, the development of functionally artificial bases can result in the generation of new biomaterials with unique properties and applications. Therefore, we herein report the design and synthesis of a photoresponsive base as a new functional or molecular "element" for constructing DNA nanomolecules. The new base is made by fusion of an azobenzene with a natural T base (zT). zT, a new molecular element, is not only the most size-expanded T analogue but also a photoresponsive base capable of specific self-assembly through hydrogen bonding. Our results showed that stable and selective self-assembly of double-stranded DNAs occurred through zT-A base pairing, but it could still be efficiently dissociated by light irradiation. The photoresponsive DNA bases will provide the versatility required for constructing desired DNA nanomolecules and nanodevices.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28585836      PMCID: PMC5877792          DOI: 10.1021/jacs.7b02865

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  43 in total

1.  Photocontrol of Triple-Helix Formation by Using Azobenzene-Bearing Oligo(thymidine) This work was partially supported by a Grant-in-Aid for Scientific Research from the Ministry of Education, Science, and Culture, Japan (Molecular Synchronization for the Design of New Material Systems). The grant from the "Research for the Future" program of the Japanese Society for the Promotion of Science (JSPS-RFTF97I00301) is also acknowledged.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-04       Impact factor: 15.336

2.  Photoresponsive 5'-cap for the reversible photoregulation of gene expression.

Authors:  Shinzi Ogasawara; Mizuo Maeda
Journal:  Bioorg Med Chem Lett       Date:  2011-07-07       Impact factor: 2.823

3.  Synthesis and biodistribution of a short nonionic oligonucleotide analogue in mouse with a potential to mimic peptides.

Authors:  B Eschgfäller; M König; F Boess; U A Boelsterli; S A Benner
Journal:  J Med Chem       Date:  1998-01-29       Impact factor: 7.446

Review 4.  Light-controlled tools.

Authors:  Clara Brieke; Falk Rohrbach; Alexander Gottschalk; Günter Mayer; Alexander Heckel
Journal:  Angew Chem Int Ed Engl       Date:  2012-07-24       Impact factor: 15.336

5.  Light-driven DNA nanomachine with a photoresponsive molecular engine.

Authors:  Yukiko Kamiya; Hiroyuki Asanuma
Journal:  Acc Chem Res       Date:  2014-03-11       Impact factor: 22.384

6.  Synthesis of azobenzene-tethered DNA for reversible photo-regulation of DNA functions: hybridization and transcription.

Authors:  Hiroyuki Asanuma; Xingguo Liang; Hidenori Nishioka; Daijiro Matsunaga; Mingzhe Liu; Makoto Komiyama
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

7.  A new four-base genetic helix, yDNA, composed of widened benzopyrimidine-purine pairs.

Authors:  Alex H F Lee; Eric T Kool
Journal:  J Am Chem Soc       Date:  2005-03-16       Impact factor: 15.419

8.  Efficient replication bypass of size-expanded DNA base pairs in bacterial cells.

Authors:  James C Delaney; Jianmin Gao; Haibo Liu; Nidhi Shrivastav; John M Essigmann; Eric T Kool
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

9.  Macroscopic volume change of dynamic hydrogels induced by reversible DNA hybridization.

Authors:  Lu Peng; Mingxu You; Quan Yuan; Cuichen Wu; Da Han; Yan Chen; Zhihua Zhong; Jiangeng Xue; Weihong Tan
Journal:  J Am Chem Soc       Date:  2012-07-09       Impact factor: 15.419

10.  Toward a new genetic system with expanded dimensions: size-expanded analogues of deoxyadenosine and thymidine.

Authors:  Haibo Liu; Jianmin Gao; Lystranne Maynard; Y David Saito; Eric T Kool
Journal:  J Am Chem Soc       Date:  2004-02-04       Impact factor: 15.419

View more
  7 in total

Review 1.  Recent advances on aptamer-based biosensors for detection of pathogenic bacteria.

Authors:  Danliang Li; Luyao Liu; Qiaoling Huang; Ting Tong; You Zhou; Zhongyu Li; Qinqin Bai; Hao Liang; Lili Chen
Journal:  World J Microbiol Biotechnol       Date:  2021-02-08       Impact factor: 3.312

2.  Floxuridine Homomeric Oligonucleotides "Hitchhike" with Albumin In Situ for Cancer Chemotherapy.

Authors:  Cheng Jin; Hui Zhang; Jianmei Zou; Yan Liu; Lin Zhang; Fengjie Li; Ruowen Wang; Wenjing Xuan; Mao Ye; Weihong Tan
Journal:  Angew Chem Int Ed Engl       Date:  2018-06-19       Impact factor: 15.336

3.  Programmable manipulation of oligonucleotide-albumin interaction for elongated circulation time.

Authors:  Cai Yang; Haitao Zhao; Yang Sun; Cheng Wang; Xinyao Geng; Ruowen Wang; Lumin Tang; Da Han; Jianjun Liu; Weihong Tan
Journal:  Nucleic Acids Res       Date:  2022-04-08       Impact factor: 16.971

Review 4.  Advances in aptamers against Aβ and applications in Aβ detection and regulation for Alzheimer's disease.

Authors:  Yan Zheng; Limin Zhang; Jinge Zhao; Lingyun Li; Minxuan Wang; Peifeng Gao; Qing Wang; Xiaoling Zhang; Weizhi Wang
Journal:  Theranostics       Date:  2022-01-31       Impact factor: 11.556

5.  Controllable DNA hybridization by host-guest complexation-mediated ligand invasion.

Authors:  Lin Xiao; Liang-Liang Wang; Chao-Qun Wu; Han Li; Qiu-Long Zhang; Yang Wang; Liang Xu
Journal:  Nat Commun       Date:  2022-10-08       Impact factor: 17.694

6.  Molecular domino reactor built by automated modular synthesis for cancer treatment.

Authors:  Yu Yang; Jiaxuan He; Wenjun Zhu; Xiaoshu Pan; Hoda Safari Yazd; Cheng Cui; Lu Yang; Xiaowei Li; Long Li; Liang Cheng; Liangzhu Feng; Ruowen Wang; Zhuang Liu; Meiwan Chen; Weihong Tan
Journal:  Theranostics       Date:  2020-03-04       Impact factor: 11.556

Review 7.  DNA Assembly-Based Stimuli-Responsive Systems.

Authors:  Shasha Lu; Jianlei Shen; Chunhai Fan; Qian Li; Xiurong Yang
Journal:  Adv Sci (Weinh)       Date:  2021-05-14       Impact factor: 16.806

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.