Literature DB >> 17377496

Proficient and accurate bypass of persistent DNA lesions by DinB DNA polymerases.

Daniel F Jarosz1, Veronica G Godoy, Graham C Walker.   

Abstract

Despite nearly universal conservation through evolution, the precise function of the DinB/pol kappa branch of the Y-family of DNA polymerases has remained unclear. Recent results suggest that DinB orthologs from all domains of life proficiently bypass replication blocking lesions that may be recalcitrant to DNA repair mechanisms. Like other translesion DNA polymerases, the error frequency of DinB and its orthologs is higher than the DNA polymerases that replicate the majority of the genome. However, recent results suggest that some Y-family polymerases, including DinB and pol kappa, bypass certain types of DNA damage with greater proficiency than an undamaged template. Moreover, they do so relatively accurately. The ability to employ this mechanism to manage DNA damage may be especially important for types of DNA modification that elude repair mechanisms. For these lesions, translesion synthesis may represent a more important line of defense than for other types of DNA damage that are more easily dealt with by other more accurate mechanisms.

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Year:  2007        PMID: 17377496     DOI: 10.4161/cc.6.7.4065

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  17 in total

1.  Mutations in the Bacillus subtilis beta clamp that separate its roles in DNA replication from mismatch repair.

Authors:  Nicole M Dupes; Brian W Walsh; Andrew D Klocko; Justin S Lenhart; Heather L Peterson; David A Gessert; Cassie E Pavlick; Lyle A Simmons
Journal:  J Bacteriol       Date:  2010-05-07       Impact factor: 3.490

Review 2.  Eukaryotic translesion polymerases and their roles and regulation in DNA damage tolerance.

Authors:  Lauren S Waters; Brenda K Minesinger; Mary Ellen Wiltrout; Sanjay D'Souza; Rachel V Woodruff; Graham C Walker
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 3.  Y-family DNA polymerases in mammalian cells.

Authors:  Caixia Guo; J Nicole Kosarek-Stancel; Tie-Shan Tang; Errol C Friedberg
Journal:  Cell Mol Life Sci       Date:  2009-04-15       Impact factor: 9.261

4.  Residues in the fingers domain of the translesion DNA polymerase DinB enable its unique participation in error-prone double-strand break repair.

Authors:  Tommy F Tashjian; Claudia Danilowicz; Anne-Elizabeth Molza; Brian H Nguyen; Chantal Prévost; Mara Prentiss; Veronica G Godoy
Journal:  J Biol Chem       Date:  2019-03-14       Impact factor: 5.157

5.  A single residue unique to DinB-like proteins limits formation of the polymerase IV multiprotein complex in Escherichia coli.

Authors:  Tiziana M Cafarelli; Thomas J Rands; Ryan W Benson; Pamela A Rudnicki; Ida Lin; Veronica G Godoy
Journal:  J Bacteriol       Date:  2013-01-04       Impact factor: 3.490

6.  Efficient replication bypass of size-expanded DNA base pairs in bacterial cells.

Authors:  James C Delaney; Jianmin Gao; Haibo Liu; Nidhi Shrivastav; John M Essigmann; Eric T Kool
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

Review 7.  New insights into replisome fluidity during chromosome replication.

Authors:  Isabel Kurth; Mike O'Donnell
Journal:  Trends Biochem Sci       Date:  2012-11-12       Impact factor: 13.807

8.  A DinB variant reveals diverse physiological consequences of incomplete TLS extension by a Y-family DNA polymerase.

Authors:  Daniel F Jarosz; Susan E Cohen; James C Delaney; John M Essigmann; Graham C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-30       Impact factor: 11.205

9.  Antibiotic resistance acquired through a DNA damage-inducible response in Acinetobacter baumannii.

Authors:  Matthew D Norton; Allison J Spilkia; Veronica G Godoy
Journal:  J Bacteriol       Date:  2013-01-11       Impact factor: 3.490

10.  Lesion-Induced Mutation in the Hyperthermophilic Archaeon Sulfolobus acidocaldarius and Its Avoidance by the Y-Family DNA Polymerase Dbh.

Authors:  Cynthia J Sakofsky; Dennis W Grogan
Journal:  Genetics       Date:  2015-07-29       Impact factor: 4.562

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