Literature DB >> 19431865

Softening of the packing density of horseradish peroxidase by a H-donor bound near the heme pocket.

J Fidy1, J M Vanderkooi, J Zollfrank, J Friedrich.   

Abstract

We use pressure tuning of spectral holes to estimate the compressibility of protein molecules by optical means. We found that the compressibility of mesoporphyrin-substituted horseradish peroxidase increases by a factor of three when it incorporates small aromatic H-donor molecules that bind in the vicinity of its heme pocket. Such a dramatic softening of its packing density corresponds to a jump from a compressibility range characteristic for the solid state into that characteristic for liquids.

Entities:  

Year:  1992        PMID: 19431865      PMCID: PMC1262277          DOI: 10.1016/S0006-3495(92)81749-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

1.  Thermodynamic fluctuations in protein molecules.

Authors:  A Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  1976-08       Impact factor: 11.205

2.  Optical, NMR and EPR properties of horseradish peroxidase and its donor complexes.

Authors:  J S Leigh; M M Maltempo; P I Ohlsson; K G Paul
Journal:  FEBS Lett       Date:  1975-03-01       Impact factor: 4.124

3.  Effects of pressure on visible spectra of complexes of myoglobin, hemoglobin, cytochrome c, and horse radish peroxidase.

Authors:  G B Ogunmola; A Zipp; F Chen; W Kauzmann
Journal:  Proc Natl Acad Sci U S A       Date:  1977-01       Impact factor: 11.205

4.  Spectroscopic studies of impurity-host interactions in dye-doped polymers: Hydrostatic-pressure effects versus temperature effects.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1987-11-15

5.  Binding of hydrogen donors to horseradish peroxidase: a spectroscopic study.

Authors:  A Schejter; A Lanir; N Epstein
Journal:  Arch Biochem Biophys       Date:  1976-05       Impact factor: 4.013

6.  Site-selected fluorescence spectra of porphyrin derivatives of heme proteins.

Authors:  J M Vanderkooi; V T Moy; G Maniara; H Koloczek; K G Paul
Journal:  Biochemistry       Date:  1985-12-31       Impact factor: 3.162

7.  Protein states and proteinquakes.

Authors:  A Ansari; J Berendzen; S F Bowne; H Frauenfelder; I E Iben; T B Sauke; E Shyamsunder; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

8.  PH dependent volume changes accompanying the binding reactions of human and pigeon methemoglobins.

Authors:  G B Ogunmola
Journal:  Biophys Chem       Date:  1980-02       Impact factor: 2.352

9.  Quenching of room temperature protein phosphorescence by added small molecules.

Authors:  D B Calhoun; S W Englander; W W Wright; J M Vanderkooi
Journal:  Biochemistry       Date:  1988-11-01       Impact factor: 3.162

10.  Long-range electron exchange measured in proteins by quenching of tryptophan phosphorescence.

Authors:  J M Vanderkooi; S W Englander; S Papp; W W Wright; C S Owen
Journal:  Proc Natl Acad Sci U S A       Date:  1990-07       Impact factor: 11.205

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  5 in total

1.  Spectral hole burning and selection of conformational substates in chromoproteins.

Authors:  J Friedrich; J Gafert; J Zollfrank; J Vanderkooi; J Fidy
Journal:  Proc Natl Acad Sci U S A       Date:  1994-02-01       Impact factor: 11.205

2.  Pigment spectra and intermolecular interaction potentials in glasses and proteins.

Authors:  I Renge; R van Grondelle; J P Dekker
Journal:  Biophys J       Date:  2007-06-08       Impact factor: 4.033

3.  The enzyme horseradish peroxidase is less compressible at higher pressures.

Authors:  László Smeller; Judit Fidy
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

4.  Interpretation of multiple Q(0,0) bands in the absorption spectrum of Mg-mesoporphyrin embedded in horseradish peroxidase.

Authors:  E Balog; K Kis-Petik; J Fidy; M Köhler; J Friedrich
Journal:  Biophys J       Date:  1997-07       Impact factor: 4.033

5.  Dissimilar flexibility of α and β subunits of human adult hemoglobin influences the protein dynamics and its alteration induced by allosteric effectors.

Authors:  Gusztáv Schay; András D Kaposi; László Smeller; Krisztián Szigeti; Judit Fidy; Levente Herenyi
Journal:  PLoS One       Date:  2018-03-27       Impact factor: 3.240

  5 in total

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