Literature DB >> 17557783

Pigment spectra and intermolecular interaction potentials in glasses and proteins.

I Renge1, R van Grondelle, J P Dekker.   

Abstract

A model is proposed for chromophore optical spectra in solids over a wide range of temperatures and pressures. Inhomogeneous band shapes and their pressure dependence, as well as baric shift coefficients of spectral lines, selected by the frequency, were derived using Lennard-Jones potentials of the ground and excited states. Quadratic electron-phonon coupling constants, describing the thermal shift and broadening of zero-phonon lines, were also calculated. Experimentally, thermal shift and broadening of spectral holes were studied between 5 and 40 K for a synthetic pigment, chlorin, embedded in polymer hosts. The baric effects on holes were determined by applying hydrostatic He gas pressure up to 200 bar, at 6 K. Absorption spectra of pheophytin a, chlorophyll a, and beta-carotene in polymers and plant photosystem II CP47 complex were measured between 5 (or 77) and 300 K, and subject to Voigtian deconvolution. A narrowing of inhomogeneous bandwidth with increasing temperature, predicted on the basis of hole behavior, was observed as the shrinking of Gaussian spectral component. The Lorentzian broadening was ascribed to optical dephasing up to 300 K in transitions with weak to moderate linear electron-phonon coupling strength. The thermal broadening is purely Gaussian in multiphonon transitions (S(2) band of beta-carotene, Soret bands of tetrapyrrolic pigments), and the Lorentz process appears to be suppressed, indicating a lack of exponential dephasing. Density, polarity, polarizability, compressibility, and other local parameters of the pigment binding sites in biologically relevant systems can be deduced from spectroscopic data, provided that sufficient background information is available.

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Year:  2007        PMID: 17557783      PMCID: PMC1965442          DOI: 10.1529/biophysj.107.104273

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  7 in total

1.  Spectral hole burning and selection of conformational substates in chromoproteins.

Authors:  J Friedrich; J Gafert; J Zollfrank; J Vanderkooi; J Fidy
Journal:  Proc Natl Acad Sci U S A       Date:  1994-02-01       Impact factor: 11.205

2.  Molecular probes: what is the range of their interaction with the environment?

Authors:  H Lesch; J Schlichter; J Friedrich; J M Vanderkooi
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

3.  Influence of temperature and pressure on shape and shift of impurity optical bands in polymer glasses.

Authors:  Indrek Renge
Journal:  J Phys Chem A       Date:  2006-03-16       Impact factor: 2.781

4.  Softening of the packing density of horseradish peroxidase by a H-donor bound near the heme pocket.

Authors:  J Fidy; J M Vanderkooi; J Zollfrank; J Friedrich
Journal:  Biophys J       Date:  1992-12       Impact factor: 4.033

5.  Identifying the lowest electronic states of the chlorophylls in the CP47 core antenna protein of photosystem II.

Authors:  Frank L De Weerd; Miguel A Palacios; Elena G Andrizhiyevskaya; Jan P Dekker; Rienk Van Grondelle
Journal:  Biochemistry       Date:  2002-12-24       Impact factor: 3.162

6.  Triplet and fluorescing states of the CP47 antenna complex of photosystem II studied as a function of temperature.

Authors:  M L Groot; E J Peterman; I H van Stokkum; J P Dekker; R van Grondelle
Journal:  Biophys J       Date:  1995-01       Impact factor: 4.033

7.  Labeling proteins via hole burning of their aromatic amino acids: pressure tuning spectroscopy of BPTI.

Authors:  Markus Stübner; Christoph Hecht; Josef Friedrich
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

  7 in total

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