Literature DB >> 1066687

Thermodynamic fluctuations in protein molecules.

A Cooper.   

Abstract

Apparently conflicting views of the physical nature of globular proteins, and other macromolecules, may be reconciled by consideration of the inevitable thermodynamic fluctuations inherent in microscopic systems. Discrete protein molecules, considered singly, undergo sizeable fluctuations in thermodynamic properties which are manifest in their stochastic properties. This is not incompatible with time-averaged studies of ensembles of proteins from which a more compact, rigid, and static view of these molecules may be obtained.

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Year:  1976        PMID: 1066687      PMCID: PMC430724          DOI: 10.1073/pnas.73.8.2740

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Proton magnetic resonance studies of the tyrosine residues of hen lysozyme-assignment and detection of conformational mobility.

Authors:  I D Campbell; C M Dobson; R J Williams
Journal:  Proc R Soc Lond B Biol Sci       Date:  1975-06-17

2.  Fast relaxation processes inn a protein revealed by the decay kinetics of tryptophan fluorescence.

Authors:  A Grinvald; I Z Steinberg
Journal:  Biochemistry       Date:  1974-12-03       Impact factor: 3.162

3.  Room temperature phosphorescence and the dynamic aspects of protein structure.

Authors:  M L Saviotti; W C Galley
Journal:  Proc Natl Acad Sci U S A       Date:  1974-10       Impact factor: 11.205

4.  The dynamic equilibrium of folding and unfolding of nuclease-T.

Authors:  H Taniuchi
Journal:  J Biol Chem       Date:  1973-07-25       Impact factor: 5.157

5.  The interpretation of protein structures: total volume, group volume distributions and packing density.

Authors:  F M Richards
Journal:  J Mol Biol       Date:  1974-01-05       Impact factor: 5.469

6.  Pressure denaturation of metmyoglobin.

Authors:  A Zipp; W Kauzmann
Journal:  Biochemistry       Date:  1973-10-09       Impact factor: 3.162

7.  Specific heat measurements on lysozyme, chymotrypsinogen, and ovalbumin in aqueous solution and in solid state.

Authors:  J Suurkuusk
Journal:  Acta Chem Scand B       Date:  1974

Review 8.  Hydrogen exchange in proteins.

Authors:  A Hvidt; S O Nielsen
Journal:  Adv Protein Chem       Date:  1966

9.  Quenching of protein fluorescence by oxygen. Detection of structural fluctuations in proteins on the nanosecond time scale.

Authors:  J R Lakowicz; G Weber
Journal:  Biochemistry       Date:  1973-10-09       Impact factor: 3.162

10.  Deuterium nuclear magnetic resonance of deuterium-labeled diacetyldeuterohemin incorporated into sperm whale myoglobin.

Authors:  O Oster; G W Neireiter; A O Clouse; F R Gurd
Journal:  J Biol Chem       Date:  1975-10-25       Impact factor: 5.157

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  83 in total

Review 1.  Protein compressibility, dynamics, and pressure.

Authors:  D P Kharakoz
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

2.  Mechanism of pressure-induced thermostabilization of proteins: studies of glutamate dehydrogenases from the hyperthermophile Thermococcus litoralis.

Authors:  M M Sun; R Caillot; G Mak; F T Robb; D S Clark
Journal:  Protein Sci       Date:  2001-09       Impact factor: 6.725

3.  Pressure-induced thermostabilization of glutamate dehydrogenase from the hyperthermophile Pyrococcus furiosus.

Authors:  M M Sun; N Tolliday; C Vetriani; F T Robb; D S Clark
Journal:  Protein Sci       Date:  1999-05       Impact factor: 6.725

4.  Structure-based thermodynamic analysis of the dissociation of protein phosphatase-1 catalytic subunit and microcystin-LR docked complexes.

Authors:  P Lavigne; J R Bagu; R Boyko; L Willard; C F Holmes; B D Sykes
Journal:  Protein Sci       Date:  2000-02       Impact factor: 6.725

5.  Exploring protein-folding ensembles: a variable-barrier model for the analysis of equilibrium unfolding experiments.

Authors:  Victor Muñoz; Jose M Sanchez-Ruiz
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-09       Impact factor: 11.205

6.  Strain-specific morphologies of yeast prion amyloid fibrils.

Authors:  Ruben Diaz-Avalos; Chih-Yen King; Joseph Wall; Martha Simon; Donald L D Caspar
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-08       Impact factor: 11.205

7.  Role of protein cavities on unfolding volume change and on internal dynamics under pressure.

Authors:  Patrizia Cioni
Journal:  Biophys J       Date:  2006-11-01       Impact factor: 4.033

8.  The utility of hydrogen/deuterium exchange mass spectrometry in biopharmaceutical comparability studies.

Authors:  Damian Houde; Steven A Berkowitz; John R Engen
Journal:  J Pharm Sci       Date:  2010-12-29       Impact factor: 3.534

9.  Using empirical phase diagrams to understand the role of intramolecular dynamics in immunoglobulin G stability.

Authors:  Joshua D Ramsey; Michelle L Gill; Tim J Kamerzell; E Shane Price; Sangeeta B Joshi; Steven M Bishop; Cynthia N Oliver; C Russell Middaugh
Journal:  J Pharm Sci       Date:  2009-07       Impact factor: 3.534

10.  On the importance of atomic fluctuations, protein flexibility, and solvent in ion permeation.

Authors:  Toby W Allen; O S Andersen; Benoit Roux
Journal:  J Gen Physiol       Date:  2004-12       Impact factor: 4.086

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