Literature DB >> 11751329

The enzyme horseradish peroxidase is less compressible at higher pressures.

László Smeller1, Judit Fidy.   

Abstract

Fluorescence line-narrowing (FLN) spectroscopy at 10 K was used to study the effect of high pressure through the prosthetic group in horseradish peroxidase (HRP), which was Mg-mesoporphyrin (MgMP) replacing the heme of the enzyme. The same measurement was performed on MgMP in a solid-state amorphous organic matrix, dimethyl sulfoxide (DMSO). Series of FLN spectra were registered to determine the (0, 0) band shape through the inhomogeneous distribution function (IDF). In the range of 0-2 GPa a red-shift of the IDF was determined, and yielded the isothermal compressibility of MgMP-HRP as 0.066 GPa(-1), which is significantly smaller than that found earlier as 0.106 GPa(-1) by fine-tuning the pressure in the range up to 1.1 MPa. The vibrational frequencies also shifted with pressure increase, as expected. The compressibility in the DMSO matrix was smaller, 0.042 GPa(-1), both when the pressure was applied at room temperature before cooling to 10 K, or at 10 K. At 200 K or above, the bimodal (0, 0) band shape in DMSO showed a population conversion under pressure that was not observed at or below 150 K. A significant atomic rearrangement was estimated from the volume change, 3.3 +/- 0.7 cm(3)/mol upon conversion. The compressibility in proteins and in amorphous solids seems not to significantly depend on the temperature and in the protein it decreases toward higher pressures.

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Year:  2002        PMID: 11751329      PMCID: PMC1302482          DOI: 10.1016/S0006-3495(02)75407-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  36 in total

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2.  Thermodynamic fluctuations in protein molecules.

Authors:  A Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  1976-08       Impact factor: 11.205

Review 3.  Flexibility of globular proteins in water as revealed by compressibility.

Authors:  K Gekko
Journal:  Adv Exp Med Biol       Date:  1991       Impact factor: 2.622

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5.  Spectroscopic studies of impurity-host interactions in dye-doped polymers: Hydrostatic-pressure effects versus temperature effects.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1987-11-15

Review 6.  Fluorescence line narrowing applied to the study of proteins.

Authors:  J Fidy; M Laberge; A D Kaposi; J M Vanderkooi
Journal:  Biochim Biophys Acta       Date:  1998-08-18

7.  Pressure-induced dissociation of brome mosaic virus.

Authors:  J L Silva; G Weber
Journal:  J Mol Biol       Date:  1988-01-05       Impact factor: 5.469

8.  Compressibility-structure relationship of globular proteins.

Authors:  K Gekko; Y Hasegawa
Journal:  Biochemistry       Date:  1986-10-21       Impact factor: 3.162

Review 9.  Pressure stability of proteins.

Authors:  J L Silva; G Weber
Journal:  Annu Rev Phys Chem       Date:  1993       Impact factor: 12.703

Review 10.  The effect of high pressure upon proteins and other biomolecules.

Authors:  G Weber; H G Drickamer
Journal:  Q Rev Biophys       Date:  1983-02       Impact factor: 5.318

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  2 in total

1.  Local compressibilities of proteins: comparison of optical experiments and simulations for horse heart cytochrome-c.

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Journal:  Biophys J       Date:  2005-04-15       Impact factor: 4.033

2.  Dissimilar flexibility of α and β subunits of human adult hemoglobin influences the protein dynamics and its alteration induced by allosteric effectors.

Authors:  Gusztáv Schay; András D Kaposi; László Smeller; Krisztián Szigeti; Judit Fidy; Levente Herenyi
Journal:  PLoS One       Date:  2018-03-27       Impact factor: 3.240

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