Literature DB >> 19416977

The ribosome as a conveying thermal ratchet machine.

Alexander S Spirin1.   

Abstract

Mesh：

Year:  2009        PMID： 19416977      PMCID： PMC2755833          DOI： 10.1074/jbc.X109.001552

Source DB:  PubMed          Journal:  J Biol Chem        ISSN： 0021-9258            Impact factor:   5.157


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  103 in total

1.  High resolution structure of the large ribosomal subunit from a mesophilic eubacterium.

Authors:  J Harms; F Schluenzen; R Zarivach; A Bashan; S Gat; I Agmon; H Bartels; F Franceschi; A Yonath
Journal:  Cell       Date:  2001-11-30       Impact factor: 41.582

2.  Recognition of cognate transfer RNA by the 30S ribosomal subunit.

Authors:  J M Ogle; D E Brodersen; W M Clemons ; M J Tarry; A P Carter; V Ramakrishnan
Journal:  Science       Date:  2001-05-04       Impact factor: 47.728

3.  The structural basis of ribosome activity in peptide bond synthesis.

Authors:  P Nissen; J Hansen; N Ban; P B Moore; T A Steitz
Journal:  Science       Date:  2000-08-11       Impact factor: 47.728

4.  Genetic regulatory mechanisms in the synthesis of proteins.

Authors:  F JACOB; J MONOD
Journal:  J Mol Biol       Date:  1961-06       Impact factor: 5.469

5.  A correlation between the compositions of deoxyribonucleic and ribonucleic acids.

Authors:  A N BELOZERSKY; A S SPIRIN
Journal:  Nature       Date:  1958-07-12       Impact factor: 49.962

6.  The nucleotide composition of ribonucleic acids of soluble and particle fractions in several species of bacteria.

Authors:  K I MIURA
Journal:  Biochim Biophys Acta       Date:  1962-01-22

7.  Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites.

Authors:  D Moazed; H F Noller
Journal:  Cell       Date:  1989-05-19       Impact factor: 41.582

8.  The interrelationship between guanosine triphosphatase and amino acid polymerization.

Authors:  Y Nishizuka; F Lipmann
Journal:  Arch Biochem Biophys       Date:  1966-09-26       Impact factor: 4.013

Review 9.  Ribosomal translocation: facts and models.

Authors:  A S Spirin
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1985

10.  Specific compact selfpacking of the ribosomal 23 S RNA.

Authors:  V D Vasiliev; O M Zalite
Journal:  FEBS Lett       Date:  1980-11-17       Impact factor: 4.124
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  38 in total

1.  Hypothesis: emergence of translation as a result of RNA helicase evolution.

Authors:  Nikolay Zenkin
Journal:  J Mol Evol       Date:  2012-04-28       Impact factor: 2.395

2.  A conserved proline switch on the ribosome facilitates the recruitment and binding of trGTPases.

Authors:  Li Wang; Fang Yang; Dejiu Zhang; Zhi Chen; Rui-Ming Xu; Knud H Nierhaus; Weimin Gong; Yan Qin
Journal:  Nat Struct Mol Biol       Date:  2012-03-11       Impact factor: 15.369

3.  Structural characterization of mRNA-tRNA translocation intermediates.

Authors:  Xabier Agirrezabala; Hstau Y Liao; Eduard Schreiner; Jie Fu; Rodrigo F Ortiz-Meoz; Klaus Schulten; Rachel Green; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-30       Impact factor: 11.205

4.  Single-molecule study of ribosome hierarchic dynamics at the peptidyl transferase center.

Authors:  Mediha Esra Altuntop; Cindy Tu Ly; Yuhong Wang
Journal:  Biophys J       Date:  2010-11-03       Impact factor: 4.033

5.  EF4 disengages the peptidyl-tRNA CCA end and facilitates back-translocation on the 70S ribosome.

Authors:  Dejiu Zhang; Kaige Yan; Guangqiao Liu; Guangtao Song; Jiejian Luo; Yi Shi; Erchao Cheng; Shan Wu; Taijiao Jiang; Jizhong Lou; Ning Gao; Yan Qin
Journal:  Nat Struct Mol Biol       Date:  2016-01-25       Impact factor: 15.369

6.  A fast dynamic mode of the EF-G-bound ribosome.

Authors:  James B Munro; Roger B Altman; Chang-Shung Tung; Kevin Y Sanbonmatsu; Scott C Blanchard
Journal:  EMBO J       Date:  2009-12-24       Impact factor: 11.598

7.  Conformational changes in switch I of EF-G drive its directional cycling on and off the ribosome.

Authors:  Cristina Ticu; Roxana Nechifor; Boray Nguyen; Melanie Desrosiers; Kevin S Wilson
Journal:  EMBO J       Date:  2009-06-18       Impact factor: 11.598

Review 8.  Structural basis for protein synthesis: snapshots of the ribosome in motion.

Authors:  Jonas Noeske; Jamie H D Cate
Journal:  Curr Opin Struct Biol       Date:  2012-08-04       Impact factor: 6.809

Review 9.  The N-end rule pathway and regulation by proteolysis.

Authors:  Alexander Varshavsky
Journal:  Protein Sci       Date:  2011-08       Impact factor: 6.725

10.  The ribosome moves: RNA mechanics and translocation.

Authors:  Harry F Noller; Laura Lancaster; Jie Zhou; Srividya Mohan
Journal:  Nat Struct Mol Biol       Date:  2017-12-07       Impact factor: 15.369
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